Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 AC093484.2-201ENST00000580996 2166 ntBASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 GPX1P1-201ENST00000388829 606 ntBASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 AC006970.2-201ENST00000450065 779 ntBASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-3A0A0B4J271 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV12-3A0A0B4J271 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV12-3A0A0B4J271 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-3A0A0B4J271 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms