Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC009237.14-201ENST00000609975 1594 ntBASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC011506.1-201ENST00000474329 610 ntBASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV5A0A0B4J1U4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 AC092667.1-201ENST00000434301 2586 ntBASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 AC145285.6-201ENST00000604632 637 ntBASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.54■□□□□ 0.4
TRGV5A0A0B4J1U4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 LINC01568-207ENST00000641790 1380 ntBASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AC004951.3-201ENST00000418645 1148 ntBASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AC011298.2-201ENST00000617989 482 ntBASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.53■□□□□ 0.4
TRGV5A0A0B4J1U4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 AC130371.2-201ENST00000619443 611 ntBASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV5A0A0B4J1U4 RCC2P6-201ENST00000526625 1557 ntBASIC17.52■□□□□ 0.39
TRGV5A0A0B4J1U4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV5A0A0B4J1U4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV5A0A0B4J1U4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV5A0A0B4J1U4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV5A0A0B4J1U4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV5A0A0B4J1U4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms