Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IGKV2-28A0A075B6P5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 PCDHB18P-201ENST00000524813 2368 ntBASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 AC104187.1-201ENST00000607510 612 ntBASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 LINC02228-203ENST00000641970 1355 ntBASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
IGKV2-28A0A075B6P5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 AL133373.2-201ENST00000623187 2828 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 AC027612.3-201ENST00000413684 1047 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 AC010141.2-201ENST00000452426 721 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L2-201ENST00000561772 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 AC005837.3-201ENST00000612163 286 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L6-201ENST00000626483 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L1-201ENST00000627662 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L8-201ENST00000629013 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L3-201ENST00000630187 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L7-201ENST00000630678 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DUX4L5-201ENST00000630834 1275 ntBASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
IGKV2-28A0A075B6P5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.9□□□□□ -0.35
IGKV2-28A0A075B6P5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.9□□□□□ -0.35
IGKV2-28A0A075B6P5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
IGKV2-28A0A075B6P5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms