Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL18P10-201ENST00000425606 538 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 RSL24D1P6-201ENST00000426934 401 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 RPL23AP1-201ENST00000428990 471 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 SCARNA9-201ENST00000530422 353 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AC012414.7-202ENST00000622705 1090 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AC016717.3-201ENST00000624730 554 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AC008758.3-201ENST00000507003 1829 ntBASIC6.27□□□□□ -1.41
SCN11AQ9UI33 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 RNA5SP397-201ENST00000391323 118 ntBASIC6.27□□□□□ -1.41
SCN11AQ9UI33 RNU4-25P-201ENST00000410569 230 ntBASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AC103987.1-201ENST00000473394 348 ntBASIC6.27□□□□□ -1.41
SCN11AQ9UI33 RNU6-709P-201ENST00000517257 104 ntBASIC6.27□□□□□ -1.41
SCN11AQ9UI33 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SCN11AQ9UI33 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 SNORA70.2-201ENST00000364506 135 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC009480.2-201ENST00000422916 432 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 ARL2BPP10-201ENST00000446487 531 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC133555.2-201ENST00000550213 292 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC022726.1-201ENST00000587475 207 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 Z98755.1-201ENST00000407015 1384 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC004817.4-201ENST00000602396 3625 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC011447.7-201ENST00000624228 1590 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 VN1R37P-201ENST00000419096 748 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 BUD31P1-201ENST00000521828 359 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 AL359757.1-201ENST00000623176 255 ntBASIC6.26□□□□□ -1.41
SCN11AQ9UI33 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.26□□□□□ -1.41
SCN11AQ9UI33 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC139713.2-214ENST00000642059 1811 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC091046.3-201ENST00000631455 1574 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 ARL4AP5-201ENST00000404372 599 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms