Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC006539.2-201ENST00000601729 572 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL137072.1-201ENST00000603444 466 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RPL12P48-201ENST00000605620 304 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC073530.2-201ENST00000623987 261 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC010401.2-201ENST00000575137 4934 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL445523.1-201ENST00000451184 1362 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC096656.1-201ENST00000623826 1364 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 ASNSP1-204ENST00000641977 1664 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC010894.1-201ENST00000313760 361 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RNU6-839P-201ENST00000363347 108 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 VN1R12P-201ENST00000403778 876 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC019050.1-201ENST00000418508 492 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 THEM7P-201ENST00000419556 672 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL139184.1-202ENST00000422303 222 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 Z93242.1-201ENST00000427102 353 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC128677.1-201ENST00000436016 442 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 NPM1P19-201ENST00000450070 712 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC097262.1-201ENST00000452559 548 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL445669.2-201ENST00000454425 421 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SNX18P26-201ENST00000458433 740 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC092754.2-201ENST00000463506 460 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RAP1BP2-201ENST00000478270 544 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RPS27P23-201ENST00000487608 251 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RPL37P23-201ENST00000492641 294 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SNX18P23-201ENST00000510867 677 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RN7SKP283-201ENST00000517197 270 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 COX6B1P6-201ENST00000522347 255 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL358913.1-201ENST00000554342 121 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 ISCA1P3-201ENST00000577104 373 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC233702.7-202ENST00000582941 211 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RPL7AP69-201ENST00000595306 806 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL451086.1-201ENST00000605596 223 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC091931.1-201ENST00000623488 728 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AL132640.3-201ENST00000630473 177 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SAMMSON-209ENST00000641222 1100 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms