Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SEMA4A-204ENST00000368285 3300 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF17-201ENST00000307658 2716 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC034229.2-201ENST00000566945 2508 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC022596.2-201ENST00000635352 3078 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC22A8-201ENST00000311438 1716 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PANDAR-201ENST00000629595 1506 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC005618.2-201ENST00000618012 2297 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC092118.1-203ENST00000335616 1317 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ODF2-206ENST00000393533 2086 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GBA-203ENST00000427500 2063 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DNASE1L3-206ENST00000483681 2099 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 Z95114.4-201ENST00000623420 3578 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 C4BPAP1-201ENST00000415474 1893 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FMN1-207ENST00000559047 4260 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LILRB1-206ENST00000396332 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 HERC2P2-201ENST00000613386 5181 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF135-204ENST00000506786 3349 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 BCL6-206ENST00000450123 2003 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM47A-201ENST00000346193 2556 ntAPPRIS P2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 C17orf75-201ENST00000225805 4581 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 HAVCR1-201ENST00000339252 1845 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC16A14-201ENST00000295190 4398 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SERF2-202ENST00000339624 506 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR345-201ENST00000362114 98 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-753P-201ENST00000363926 107 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 S100A4-202ENST00000368714 531 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GSTM2-203ENST00000369829 914 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-129P-201ENST00000391022 107 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RPS4XP3-201ENST00000398541 413 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL606845.1-201ENST00000404881 255 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-77P-201ENST00000410554 91 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-712P-201ENST00000410558 100 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms