Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC012618.3-205ENST00000637896 1496 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 OR1S2-201ENST00000302592 978 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 RNU4-20P-201ENST00000365601 151 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 MIR548M-201ENST00000408260 86 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 RNU2-64P-201ENST00000411315 191 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 HMGB3P2-201ENST00000411913 584 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 DPY19L1P2-201ENST00000426647 915 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 SRIP2-201ENST00000428470 166 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 PPIAP17-201ENST00000438507 471 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 RN7SL83P-201ENST00000468131 297 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 HMGB1P28-201ENST00000507778 552 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 NRBF2P4-201ENST00000520874 850 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AP001189.2-201ENST00000527320 189 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC068587.4-201ENST00000533893 186 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC009117.1-201ENST00000563948 554 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 RN7SL835P-201ENST00000579920 262 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 ACP5-208ENST00000590420 301 ntTSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC115621.1-201ENST00000604653 858 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 MIR8075-201ENST00000614354 80 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 RMST_9.1-201ENST00000619945 193 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC079597.1-201ENST00000624306 508 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 AC026108.1-201ENST00000635444 547 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 MKKS-204ENST00000639674 192 ntBASIC8.08□□□□□ -1.12
LRCH3Q96II8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LRCH3Q96II8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.08□□□□□ -1.12
LRCH3Q96II8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 MKI67P1-201ENST00000604297 1460 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC006378.2-201ENST00000623178 2476 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 CASC19-205ENST00000641013 1411 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 NACAP2-201ENST00000318548 624 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 OR9K1P-201ENST00000326513 941 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 RPL7P26-201ENST00000333817 754 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 SET-203ENST00000372688 801 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 SNORA70I-201ENST00000384544 135 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 MIR16-1-201ENST00000385271 89 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 RNU6-1158P-201ENST00000391167 107 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 MTCO2P33-201ENST00000402100 465 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 NPM1P38-201ENST00000403835 865 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 SNORA2C-201ENST00000408564 137 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AL354890.1-201ENST00000413730 346 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 RPS7P14-201ENST00000426405 583 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 RPL34P27-201ENST00000428810 349 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AMYP1-201ENST00000440059 1023 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC007383.1-201ENST00000445875 636 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC093799.1-201ENST00000452411 499 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 RPL18AP17-201ENST00000455326 198 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC002075.1-201ENST00000457396 676 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC090589.1-201ENST00000473109 362 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms