Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP001160.4-201ENST00000596971 382 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 BX284613.1-201ENST00000452221 1641 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC002525.1-201ENST00000624392 1622 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC137056.2-201ENST00000624055 1958 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 SNORD51.1-201ENST00000365405 77 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 RNU6-40P-201ENST00000384254 107 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL050305.1-201ENST00000399993 1230 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL391422.1-201ENST00000402155 436 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP286-201ENST00000410894 299 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL024507.1-201ENST00000412741 274 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC092570.3-201ENST00000420113 693 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 MORF4L1P7-201ENST00000426038 703 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 RPL19P16-201ENST00000433839 588 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 ELOCP3-201ENST00000439303 348 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 Z83846.1-201ENST00000446798 265 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 YWHAEP1-201ENST00000453697 763 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 PPIAP19-201ENST00000486414 492 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP99-201ENST00000517028 307 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 SOX5P1-201ENST00000524155 1127 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC027369.5-201ENST00000533838 755 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC027544.3-201ENST00000535082 757 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC019322.1-201ENST00000571869 389 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 FAM60CP-201ENST00000591086 664 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC146944.4-201ENST00000602697 718 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 ELOCP35-201ENST00000604289 336 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC093424.1-201ENST00000604999 338 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC104695.2-201ENST00000605056 775 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC010245.2-201ENST00000606908 1167 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC018926.1-201ENST00000616335 435 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 U6.48-201ENST00000618523 106 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 DDX6P1-205ENST00000441966 1436 ntBASIC5.31□□□□□ -1.56
ZNF549Q6P9A3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ZNF549Q6P9A3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms