Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 ZNF658B-201ENST00000602828 3408 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC009779.8-201ENST00000641684 4384 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 OR2M1P-201ENST00000318104 951 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AL121657.1-201ENST00000327215 531 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 RNU1-55P-201ENST00000365510 158 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 YWHAZP4-201ENST00000392459 708 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 RN7SKP240-201ENST00000410583 375 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 TPMTP3-201ENST00000411928 735 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 Z97055.1-201ENST00000419730 712 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC004448.2-201ENST00000422360 586 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 TRIM60P18-201ENST00000441518 828 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 GAPDHP37-201ENST00000442317 968 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 PFN1P11-201ENST00000445829 389 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 MTND4P19-201ENST00000446659 478 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 UBBP5-201ENST00000446970 266 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 NANOGNBP1-201ENST00000448444 480 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 TMED11P-201ENST00000479478 690 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 OR11I1P-201ENST00000486033 954 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC091951.2-201ENST00000500762 203 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC113367.2-201ENST00000505749 160 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC104090.1-201ENST00000506341 1171 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 ARL2BPP4-201ENST00000506854 471 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC091849.1-201ENST00000509920 121 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 RNU6-875P-201ENST00000516488 106 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 RNU6-678P-201ENST00000516832 109 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 SNORA20.3-201ENST00000516880 132 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 KCTD9P4-201ENST00000526766 1166 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 EIF1P6-201ENST00000600054 334 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AL049840.5-201ENST00000602827 552 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC091193.1-201ENST00000604640 448 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 Z98200.1-201ENST00000607298 470 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AP003789.1-201ENST00000617737 605 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC111152.1-202ENST00000635848 339 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC009120.2-204ENST00000621548 2032 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 AL662795.2-201ENST00000624252 3706 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 IFIT1P1-201ENST00000400497 1449 ntBASIC6.92□□□□□ -1.3
RNF43Q68DV7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RNF43Q68DV7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF43Q68DV7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC017104.4-201ENST00000636283 1592 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 RNA5SP140-201ENST00000364524 92 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 RNU6-932P-201ENST00000391108 106 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 RPL17P50-201ENST00000396131 546 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC016769.2-201ENST00000414815 475 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 MRPS21P5-201ENST00000417885 231 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms