Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 OR7E11P-202ENST00000642027 1491 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL049555.1-201ENST00000562834 1933 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC009135.2-201ENST00000624136 1768 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 OR56A4-201ENST00000330728 1209 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 RNU1-16P-201ENST00000365477 164 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 Y_RNA.478-201ENST00000384358 107 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 RNU6-101P-201ENST00000410323 104 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 Y_RNA.646-201ENST00000410980 101 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 RPL21P24-201ENST00000413752 448 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 YWHAZP3-201ENST00000415292 738 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AL807761.1-201ENST00000417622 171 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC093107.1-201ENST00000422772 609 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC003071.2-201ENST00000423857 315 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 Z68868.1-201ENST00000429048 544 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 DDX11L10-201ENST00000430178 571 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC108039.2-201ENST00000440214 359 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC092647.2-201ENST00000452998 253 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC004692.1-201ENST00000455430 424 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC022730.2-201ENST00000465359 452 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 RN7SL228P-201ENST00000470060 303 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC073522.1-201ENST00000483312 377 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC122714.1-201ENST00000502510 459 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 Y_RNA.673-201ENST00000516306 88 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC083923.1-201ENST00000523708 376 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AP001189.2-201ENST00000527320 189 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AP001180.3-201ENST00000582221 145 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 SDR42E1P1-201ENST00000611327 477 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AL021879.1-201ENST00000611756 288 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 AL353898.2-201ENST00000623000 255 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 AC011447.6-201ENST00000623510 2598 ntBASIC8.3□□□□□ -1.08
VARS2Q5ST30 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARS2Q5ST30 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
VARS2Q5ST30 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 KYNUP1-201ENST00000466683 1406 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC00561-201ENST00000565815 2738 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 MRPS17P1-201ENST00000596009 3130 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms