Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CDH17Q12864 AL391361.1-201ENST00000405580 489 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH17Q12864 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 DDX39BP1-205ENST00000422507 192 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 AL450023.3-201ENST00000440592 271 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH17Q12864 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH17Q12864 FAR2P1-206ENST00000449736 709 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 AC097484.1-201ENST00000471148 389 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 COPS8P2-201ENST00000473228 627 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH17Q12864 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH17Q12864 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH17Q12864 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH17Q12864 AC004825.1-201ENST00000555068 586 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 AC007225.2-201ENST00000562529 256 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH17Q12864 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH17Q12864 MIR6768-201ENST00000610734 72 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH17Q12864 AC112255.1-201ENST00000624070 2493 ntBASIC5.09□□□□□ -1.59
CDH17Q12864 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH17Q12864 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.6
CDH17Q12864 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH17Q12864 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH17Q12864 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.09□□□□□ -1.6
CDH17Q12864 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CDH17Q12864 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH17Q12864 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 ZNF733P-202ENST00000444809 1573 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH17Q12864 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH17Q12864 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 ATP5HP3-201ENST00000396994 486 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 AC013442.1-201ENST00000397347 228 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 LRRC37BP1-201ENST00000398851 714 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 SNORA79B-201ENST00000410557 148 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 SETP15-201ENST00000412724 337 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 PTP4A1P1-201ENST00000420539 515 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 AC012512.1-201ENST00000446594 718 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 HMGB1P4-201ENST00000455362 567 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 RN7SL172P-201ENST00000460535 303 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH17Q12864 AC010350.1-201ENST00000504908 231 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH17Q12864 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH17Q12864 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH17Q12864 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH17Q12864 EIF4A2P5-201ENST00000529914 499 ntBASIC5.08□□□□□ -1.6
CDH17Q12864 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH17Q12864 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH17Q12864 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH17Q12864 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH17Q12864 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH17Q12864 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH17Q12864 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH17Q12864 AC068446.1-201ENST00000556425 1549 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH17Q12864 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH17Q12864 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH17Q12864 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH17Q12864 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH17Q12864 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH17Q12864 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH17Q12864 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH17Q12864 SNORA73.1-201ENST00000363107 205 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH17Q12864 MIR137-201ENST00000385223 102 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AP000534.2-201ENST00000412729 568 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 NANOGP4-201ENST00000427230 913 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH17Q12864 SNRPFP2-201ENST00000440710 251 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AL157385.1-201ENST00000446973 268 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 BTF3P6-201ENST00000448054 499 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 PPIAP20-201ENST00000449839 135 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AC092647.2-201ENST00000452998 253 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AL691482.1-201ENST00000453255 87 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AC239798.3-201ENST00000454459 408 ntBASIC5.07□□□□□ -1.6
CDH17Q12864 AL356981.1-201ENST00000454879 684 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms