Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL139421.1-201ENST00000423010 169 ntBASIC6.2□□□□□ -1.42
YBX1P67809 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.2□□□□□ -1.42
YBX1P67809 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 MTND1P30-201ENST00000441241 901 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 AC023271.1-201ENST00000445936 1090 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.2□□□□□ -1.42
YBX1P67809 KATNBL1P6-201ENST00000453433 915 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC018638.3-201ENST00000461273 132 ntBASIC6.2□□□□□ -1.42
YBX1P67809 RPL31P58-201ENST00000469001 379 ntBASIC6.2□□□□□ -1.42
YBX1P67809 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 GM2AP2-201ENST00000491764 562 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC096751.1-202ENST00000502691 1067 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC104090.1-201ENST00000506341 1171 ntBASIC6.2□□□□□ -1.42
YBX1P67809 RPL37P25-201ENST00000507308 276 ntBASIC6.2□□□□□ -1.42
YBX1P67809 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 AC006499.4-201ENST00000510947 694 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC093816.1-201ENST00000515076 913 ntBASIC6.2□□□□□ -1.42
YBX1P67809 RN7SKP141-201ENST00000516167 338 ntBASIC6.2□□□□□ -1.42
YBX1P67809 Vault.2-201ENST00000516519 98 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.2□□□□□ -1.42
YBX1P67809 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 AL121579.1-201ENST00000555129 305 ntBASIC6.2□□□□□ -1.42
YBX1P67809 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 AC084757.1-201ENST00000559987 490 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.2□□□□□ -1.42
YBX1P67809 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.2□□□□□ -1.42
YBX1P67809 BNIP3P33-201ENST00000598912 569 ntBASIC6.2□□□□□ -1.42
YBX1P67809 NDUFA8P1-201ENST00000605525 367 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC004067.1-201ENST00000608733 700 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC097505.1-201ENST00000610199 565 ntBASIC6.2□□□□□ -1.42
YBX1P67809 RMST_5.1-201ENST00000618704 126 ntBASIC6.2□□□□□ -1.42
YBX1P67809 AC016717.3-201ENST00000624730 554 ntBASIC6.2□□□□□ -1.42
YBX1P67809 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.2□□□□□ -1.42
YBX1P67809 OR5AK4P-201ENST00000635912 903 ntBASIC6.2□□□□□ -1.42
YBX1P67809 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.2□□□□□ -1.42
YBX1P67809 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.2□□□□□ -1.42
YBX1P67809 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
YBX1P67809 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 AC005725.1-201ENST00000577346 2607 ntBASIC6.19□□□□□ -1.42
YBX1P67809 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 AL117339.4-201ENST00000608335 7063 ntBASIC6.19□□□□□ -1.42
YBX1P67809 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 AKAP17BP-201ENST00000431706 2719 ntBASIC6.19□□□□□ -1.42
YBX1P67809 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
YBX1P67809 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 FAM32BP-201ENST00000344033 333 ntBASIC6.19□□□□□ -1.42
YBX1P67809 IL6STP1-201ENST00000346911 1020 ntBASIC6.19□□□□□ -1.42
YBX1P67809 RNU4-21P-201ENST00000362802 126 ntBASIC6.19□□□□□ -1.42
YBX1P67809 snoZ40.1-201ENST00000364540 72 ntBASIC6.19□□□□□ -1.42
YBX1P67809 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
YBX1P67809 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 MIR1282-201ENST00000408865 101 ntBASIC6.19□□□□□ -1.42
YBX1P67809 RNU2-66P-201ENST00000410650 161 ntBASIC6.19□□□□□ -1.42
YBX1P67809 MTCO1P17-201ENST00000411522 491 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.19□□□□□ -1.42
YBX1P67809 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 FNDC3CP-201ENST00000420795 1155 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AC009784.1-201ENST00000426484 460 ntBASIC6.19□□□□□ -1.42
YBX1P67809 ETF1P3-201ENST00000430422 1160 ntBASIC6.19□□□□□ -1.42
YBX1P67809 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 H3F3BP1-201ENST00000440551 403 ntBASIC6.19□□□□□ -1.42
YBX1P67809 EIF5AP4-201ENST00000441206 465 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.19□□□□□ -1.42
YBX1P67809 AL050341.1-201ENST00000447743 313 ntBASIC6.19□□□□□ -1.42
YBX1P67809 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 TPT1P7-201ENST00000458300 517 ntBASIC6.19□□□□□ -1.42
YBX1P67809 NCOR1P1-202ENST00000486162 291 ntBASIC6.19□□□□□ -1.42
YBX1P67809 PDCL3P4-201ENST00000489621 720 ntBASIC6.19□□□□□ -1.42
YBX1P67809 MTND6P8-201ENST00000503471 522 ntBASIC6.19□□□□□ -1.42
YBX1P67809 MYL12BP2-201ENST00000503948 512 ntBASIC6.19□□□□□ -1.42
YBX1P67809 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 AC131392.1-201ENST00000506490 633 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms