Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.88□□□□□ -0.99
ATN1P54259 BX248409.1-201ENST00000455497 255 ntBASIC8.88□□□□□ -0.99
ATN1P54259 RPS23P3-201ENST00000470993 430 ntBASIC8.88□□□□□ -0.99
ATN1P54259 RN7SL259P-201ENST00000478499 253 ntBASIC8.88□□□□□ -0.99
ATN1P54259 RPS4XP18-201ENST00000495480 763 ntBASIC8.88□□□□□ -0.99
ATN1P54259 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.88□□□□□ -0.99
ATN1P54259 RNU6-479P-201ENST00000516348 105 ntBASIC8.88□□□□□ -0.99
ATN1P54259 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.88□□□□□ -0.99
ATN1P54259 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.88□□□□□ -0.99
ATN1P54259 AC093635.1-201ENST00000609028 555 ntBASIC8.88□□□□□ -0.99
ATN1P54259 AC018445.2-201ENST00000622987 260 ntBASIC8.88□□□□□ -0.99
ATN1P54259 AC069542.2-201ENST00000624816 216 ntBASIC8.88□□□□□ -0.99
ATN1P54259 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.88□□□□□ -0.99
ATN1P54259 AL606534.2-204ENST00000635008 178 ntBASIC8.88□□□□□ -0.99
ATN1P54259 AC008013.2-202ENST00000637965 364 ntBASIC8.88□□□□□ -0.99
ATN1P54259 GLDCP1-201ENST00000510885 2678 ntBASIC8.88□□□□□ -0.99
ATN1P54259 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ATN1P54259 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
ATN1P54259 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 USP9YP4-201ENST00000424401 1745 ntBASIC8.88□□□□□ -0.99
ATN1P54259 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.88□□□□□ -0.99
ATN1P54259 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
ATN1P54259 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.88□□□□□ -0.99
ATN1P54259 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ATN1P54259 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.88□□□□□ -0.99
ATN1P54259 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.87□□□□□ -0.99
ATN1P54259 AL133279.3-201ENST00000563140 2352 ntBASIC8.87□□□□□ -0.99
ATN1P54259 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 AC108751.5-201ENST00000492880 1336 ntBASIC8.87□□□□□ -0.99
ATN1P54259 PSMC1P7-201ENST00000495689 1315 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC018765.1-201ENST00000623357 3446 ntBASIC8.87□□□□□ -0.99
ATN1P54259 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 RNA5SP302-201ENST00000364896 100 ntBASIC8.87□□□□□ -0.99
ATN1P54259 Y_RNA.539-201ENST00000384635 107 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC110754.1-201ENST00000399740 601 ntBASIC8.87□□□□□ -0.99
ATN1P54259 RNU4-25P-201ENST00000410569 230 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.87□□□□□ -0.99
ATN1P54259 AC048351.1-201ENST00000420064 602 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC005019.1-201ENST00000436455 431 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 TUBBP11-201ENST00000472255 252 ntBASIC8.87□□□□□ -0.99
ATN1P54259 RN7SL418P-201ENST00000473031 287 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.87□□□□□ -0.99
ATN1P54259 Y_RNA.715-201ENST00000517082 110 ntBASIC8.87□□□□□ -0.99
ATN1P54259 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC8.87□□□□□ -0.99
ATN1P54259 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.87□□□□□ -0.99
ATN1P54259 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.87□□□□□ -0.99
ATN1P54259 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.87□□□□□ -0.99
ATN1P54259 PPIAP14-201ENST00000577627 496 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC090415.1-201ENST00000581877 847 ntBASIC8.87□□□□□ -0.99
ATN1P54259 BNIP3P25-201ENST00000596023 559 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AC130352.1-201ENST00000602979 661 ntBASIC8.87□□□□□ -0.99
ATN1P54259 SNORD58B-201ENST00000607313 66 ntBASIC8.87□□□□□ -0.99
ATN1P54259 AL138960.1-201ENST00000613838 513 ntBASIC8.87□□□□□ -0.99
ATN1P54259 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.87□□□□□ -0.99
ATN1P54259 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.87□□□□□ -0.99
ATN1P54259 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
ATN1P54259 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
ATN1P54259 AC008895.1-201ENST00000624074 2622 ntBASIC8.87□□□□□ -0.99
ATN1P54259 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
ATN1P54259 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 HDAC1P1-201ENST00000455482 1445 ntBASIC8.87□□□□□ -0.99
ATN1P54259 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.87□□□□□ -0.99
ATN1P54259 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ATN1P54259 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ATN1P54259 AL590004.4-201ENST00000566733 7060 ntBASIC8.86□□□□□ -0.99
ATN1P54259 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 DDX18P6-201ENST00000450119 1997 ntBASIC8.86□□□□□ -0.99
ATN1P54259 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.86□□□□□ -0.99
ATN1P54259 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.86□□□□□ -0.99
ATN1P54259 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ATN1P54259 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
ATN1P54259 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms