Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RN7SL600P-201ENST00000581811 299 ntBASIC5.23□□□□□ -1.57
HTTP42858 U3.53-201ENST00000628922 216 ntBASIC5.23□□□□□ -1.57
HTTP42858 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HTTP42858 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
HTTP42858 AL731532.1-201ENST00000623972 4236 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC068769.1-201ENST00000474767 2426 ntBASIC5.23□□□□□ -1.57
HTTP42858 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.23□□□□□ -1.57
HTTP42858 RN7SKP202-201ENST00000410439 330 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC114814.2-201ENST00000419195 485 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC091564.1-201ENST00000464563 479 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC119751.5-201ENST00000514077 770 ntBASIC5.23□□□□□ -1.57
HTTP42858 AP000827.1-201ENST00000527814 258 ntBASIC5.23□□□□□ -1.57
HTTP42858 AP001160.4-201ENST00000596971 382 ntBASIC5.23□□□□□ -1.57
HTTP42858 AL133243.1-201ENST00000614487 366 ntBASIC5.23□□□□□ -1.57
HTTP42858 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HTTP42858 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 AL355834.1-201ENST00000556602 3965 ntBASIC5.23□□□□□ -1.57
HTTP42858 AP000542.3-201ENST00000623391 6114 ntBASIC5.22□□□□□ -1.57
HTTP42858 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.22□□□□□ -1.57
HTTP42858 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HTTP42858 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.22□□□□□ -1.57
HTTP42858 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.22□□□□□ -1.57
HTTP42858 AC011471.1-201ENST00000585766 187 ntBASIC5.22□□□□□ -1.57
HTTP42858 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.22□□□□□ -1.57
HTTP42858 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.22□□□□□ -1.57
HTTP42858 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 CASC19-243ENST00000641588 1546 ntBASIC5.22□□□□□ -1.57
HTTP42858 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.22□□□□□ -1.57
HTTP42858 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 YY1P1-201ENST00000427625 668 ntBASIC5.22□□□□□ -1.57
HTTP42858 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.22□□□□□ -1.57
HTTP42858 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.22□□□□□ -1.57
HTTP42858 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.22□□□□□ -1.57
HTTP42858 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.22□□□□□ -1.57
HTTP42858 AL139254.3-201ENST00000641097 674 ntBASIC5.22□□□□□ -1.57
HTTP42858 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HTTP42858 RNA5SP124-201ENST00000362739 110 ntBASIC5.21□□□□□ -1.57
HTTP42858 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.21□□□□□ -1.57
HTTP42858 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.21□□□□□ -1.57
HTTP42858 AC073052.1-201ENST00000440417 714 ntBASIC5.21□□□□□ -1.57
HTTP42858 AP003730.1-201ENST00000524605 285 ntBASIC5.21□□□□□ -1.57
HTTP42858 OR4A6P-201ENST00000534364 970 ntBASIC5.21□□□□□ -1.57
HTTP42858 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.21□□□□□ -1.57
HTTP42858 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HTTP42858 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.21□□□□□ -1.57
HTTP42858 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
HTTP42858 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.58
HTTP42858 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.21□□□□□ -1.58
HTTP42858 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HTTP42858 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HTTP42858 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.21□□□□□ -1.58
HTTP42858 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.21□□□□□ -1.58
HTTP42858 AP001357.1-201ENST00000586304 1053 ntBASIC5.21□□□□□ -1.58
HTTP42858 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 AC063976.2-201ENST00000425667 3556 ntBASIC5.21□□□□□ -1.58
HTTP42858 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.21□□□□□ -1.58
HTTP42858 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HTTP42858 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HTTP42858 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.21□□□□□ -1.58
HTTP42858 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.21□□□□□ -1.58
HTTP42858 AC007998.4-201ENST00000612496 2533 ntBASIC5.21□□□□□ -1.58
HTTP42858 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.21□□□□□ -1.58
HTTP42858 RPL23AP52-201ENST00000439311 478 ntBASIC5.21□□□□□ -1.58
HTTP42858 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.21□□□□□ -1.58
HTTP42858 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.21□□□□□ -1.58
HTTP42858 AC053481.4-201ENST00000583164 216 ntBASIC5.21□□□□□ -1.58
HTTP42858 BNIP3P19-201ENST00000605397 577 ntBASIC5.21□□□□□ -1.58
HTTP42858 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.21□□□□□ -1.58
HTTP42858 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HTTP42858 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HTTP42858 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms