Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 AL049830.4-201ENST00000555149 351 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AC023389.2-201ENST00000580031 955 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AL022401.1-201ENST00000619498 108 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 TCP11X1-202ENST00000622971 1372 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AL078595.2-201ENST00000605309 1780 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 RNA5SP123-201ENST00000363244 119 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 CHMP1B2P-201ENST00000399581 597 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 GTF2IP5-201ENST00000414608 731 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 CHEK2P3-201ENST00000416118 248 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC117434.1-201ENST00000419971 836 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 OR5M12P-201ENST00000423388 929 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 PTMAP6-201ENST00000439110 327 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 MYO5BP2-201ENST00000449815 1277 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC116562.1-201ENST00000485355 781 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC016180.1-201ENST00000567945 403 ntBASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQB2P05538 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AP005435.3-201ENST00000531260 3198 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC008758.3-201ENST00000507003 1829 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 SNORA70-201ENST00000384436 135 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 NPM1P38-201ENST00000403835 865 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 REREP1Y-201ENST00000422655 198 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 REREP2Y-201ENST00000439103 200 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 CEACAMP7-201ENST00000444105 496 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 RN7SL517P-201ENST00000462240 305 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 GCSHP4-201ENST00000538792 439 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC044860.2-201ENST00000561005 179 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC015914.2-201ENST00000618167 288 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC091905.4-201ENST00000623432 202 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AC112694.2-201ENST00000623697 768 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AL353662.3-201ENST00000625131 237 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 AL731532.2-201ENST00000623542 1953 ntBASIC4.98□□□□□ -1.61
HLA-DQB2P05538 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQB2P05538 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQB2P05538 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms