Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 SEPT7P3-201ENST00000455017 621 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC026348.1-201ENST00000462549 1053 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC024558.1-201ENST00000505008 528 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 PGAM1P13-201ENST00000507497 754 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AL049779.2-201ENST00000553847 315 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC009597.2-201ENST00000604659 592 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC011626.1-201ENST00000604710 562 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AF117829.2-201ENST00000619538 361 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 MIR6839-201ENST00000620425 113 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 PABPC1P6-201ENST00000445594 1829 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC005294.1-201ENST00000355509 281 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RNA5SP187-201ENST00000384400 119 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 MIR589-201ENST00000385238 99 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-564P-201ENST00000410983 104 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC079809.1-201ENST00000415468 276 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 HYALP1-201ENST00000417674 1279 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SLC35E1P1-201ENST00000419313 864 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 CLUHP1-201ENST00000435012 1190 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 CCRL1P1-201ENST00000449542 1053 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RPL31P20-201ENST00000449593 360 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 MYO5BP2-201ENST00000449815 1277 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 DNAJB5P1-201ENST00000454004 806 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC108161.1-201ENST00000461060 402 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RPS4XP1-201ENST00000482189 787 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RN7SL814P-201ENST00000487715 300 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AP000859.1-201ENST00000525536 307 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 OR7E10P-201ENST00000526420 991 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 OR7E18P-201ENST00000592589 702 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC069307.1-201ENST00000602820 447 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL512329.2-201ENST00000607350 548 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC007620.3-201ENST00000608131 497 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC026367.3-201ENST00000619032 590 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC074140.1-201ENST00000621617 208 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AL034549.2-201ENST00000618285 3373 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 AC023421.1-201ENST00000590535 1785 ntBASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
ATG4BQ9Y4P1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AL590763.1-201ENST00000398297 1545 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms