Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 QRSL1P2-201ENST00000418582 964 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL034379.1-201ENST00000423216 253 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC005033.1-201ENST00000428904 813 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC104849.1-201ENST00000462623 405 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 RN7SL799P-201ENST00000475891 298 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 MORF4L2P1-201ENST00000503761 858 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL671862.1-201ENST00000515851 349 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC005868.1-201ENST00000536421 331 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 MIR4489-201ENST00000578869 62 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AC104687.2-201ENST00000604442 342 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL139041.1-201ENST00000605480 610 ntBASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TREX1Q9NSU2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5□□□□□ -1.61
TREX1Q9NSU2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 ZNF733P-202ENST00000444809 1573 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5□□□□□ -1.61
TREX1Q9NSU2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5□□□□□ -1.61
TREX1Q9NSU2 SNORA73.1-201ENST00000363107 205 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 SNORA70.10-201ENST00000384515 134 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 MIR223-201ENST00000385204 110 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 AC007068.1-201ENST00000396690 844 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5□□□□□ -1.61
TREX1Q9NSU2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5□□□□□ -1.61
TREX1Q9NSU2 OR7E125P-201ENST00000443450 846 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC093166.2-201ENST00000455969 1017 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 RPS26P39-201ENST00000469206 341 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5□□□□□ -1.61
TREX1Q9NSU2 HMGN2P25-201ENST00000486956 268 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 RN7SL30P-201ENST00000488416 306 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5□□□□□ -1.61
TREX1Q9NSU2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5□□□□□ -1.61
TREX1Q9NSU2 RNA5SP43-201ENST00000516559 110 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 RN7SKP260-201ENST00000516907 149 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5□□□□□ -1.61
TREX1Q9NSU2 EIF4A2P5-201ENST00000529914 499 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5□□□□□ -1.61
TREX1Q9NSU2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 AL049830.4-201ENST00000555149 351 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5□□□□□ -1.61
TREX1Q9NSU2 TAS2R6P-201ENST00000605022 826 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC037198.3-201ENST00000616754 526 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 UOX-205ENST00000640983 544 ntTSL 4 BASIC5□□□□□ -1.61
TREX1Q9NSU2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5□□□□□ -1.61
TREX1Q9NSU2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 AL672167.1-204ENST00000641875 3017 ntBASIC5□□□□□ -1.61
TREX1Q9NSU2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
TREX1Q9NSU2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TREX1Q9NSU2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC112198.2-201ENST00000426589 6996 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AL022393.1-201ENST00000625142 1677 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms