Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL391422.1-201ENST00000402155 436 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 HMGB1P20-201ENST00000402555 677 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 Y_RNA.604-201ENST00000410574 102 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL445213.1-201ENST00000412589 747 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 HMGA1P8-201ENST00000414130 321 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL356320.2-201ENST00000417263 507 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 ELOCP9-201ENST00000418624 239 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC011233.1-201ENST00000422812 283 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 ISCA1P2-201ENST00000438679 421 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 MTND2P20-201ENST00000440805 661 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 SPRYD7P1-201ENST00000443861 570 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC016027.4-201ENST00000450866 277 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC115223.1-201ENST00000466377 870 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC108734.3-201ENST00000481241 1165 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 RN7SL727P-201ENST00000482164 296 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 UBA52P7-201ENST00000486088 380 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 RNU5A-4P-201ENST00000516588 111 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC105185.1-201ENST00000518705 535 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 FAM27E4-201ENST00000605259 342 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC124312.4-201ENST00000605533 310 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC103591.3-201ENST00000608684 209 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL354976.1-201ENST00000613843 387 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC037198.3-201ENST00000616754 526 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AL158163.2-201ENST00000619110 700 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 BX005019.1-201ENST00000561881 1810 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 AC016583.1-201ENST00000624221 2431 ntBASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDLIM7Q9NR12 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AL359715.4-201ENST00000606629 1436 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 RNA5SP394-201ENST00000364216 119 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 RNU4-75P-201ENST00000364621 146 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 NUDT19P3-201ENST00000404698 555 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AP000534.2-201ENST00000412729 568 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 OR2AT2P-201ENST00000413438 905 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 OR5BE1P-201ENST00000425977 939 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 CFL1P1-202ENST00000432948 411 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 NANOGP2-201ENST00000435391 727 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC079922.1-201ENST00000443291 359 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 OTX2P1-201ENST00000450956 354 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 MRPL35P4-201ENST00000453682 566 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 RNU7-125P-201ENST00000458760 62 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC114728.1-201ENST00000488289 483 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 NDUFA5P12-201ENST00000503796 343 ntBASIC6.69□□□□□ -1.34
PDLIM7Q9NR12 AC006499.3-201ENST00000506077 748 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms