Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC004948.1-201ENST00000609858 672 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC068726.1-201ENST00000610993 341 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 U1.41-201ENST00000617626 165 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC069209.1-201ENST00000619282 651 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 AC009120.2-204ENST00000621548 2032 ntBASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PTCHD1Q96NR3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 MRRFP1-201ENST00000435941 1675 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CASC19-228ENST00000641414 1684 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 MRPS6P2-201ENST00000381143 370 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SNORA75-201ENST00000384158 137 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RN7SKP188-201ENST00000410789 317 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RNGTTP1-201ENST00000420965 728 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CYCSP46-201ENST00000423569 204 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 DPPA2P1-201ENST00000428060 556 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC008072.1-201ENST00000434254 824 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RPS26P30-201ENST00000443431 335 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC011742.2-201ENST00000443818 352 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 MGAT2P1-201ENST00000449718 797 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RFC5P1-201ENST00000454419 874 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC099670.1-201ENST00000455141 783 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 TPT1P7-201ENST00000458300 517 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC131392.1-201ENST00000506490 633 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC138866.2-201ENST00000508650 584 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 GUSBP9-201ENST00000510138 584 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC006499.4-201ENST00000510947 694 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC093664.1-201ENST00000511779 289 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 FABP5P5-201ENST00000515537 406 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RNU6-1004P-201ENST00000516584 111 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 IGHV3-63-201ENST00000518422 341 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AP003392.2-201ENST00000527269 208 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 MIR3157-201ENST00000578688 85 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 OR4K7P-201ENST00000580232 945 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SYPL1P2-201ENST00000582878 727 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC091805.2-201ENST00000603848 235 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AL445647.2-201ENST00000615170 130 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC095031.1-201ENST00000623685 672 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC018692.2-201ENST00000624130 348 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC114546.4-201ENST00000624413 369 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 ZNF733P-202ENST00000444809 1573 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 MTND4P31-201ENST00000425607 1343 ntBASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCHD1Q96NR3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms