Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RNA5SP373-201ENST00000517271 95 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC090888.3-201ENST00000558917 509 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC067805.1-201ENST00000559344 470 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC011626.1-201ENST00000604710 562 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 FAM72A-208ENST00000607379 1139 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 MIR6861-201ENST00000618657 64 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC074101.1-201ENST00000637861 241 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 MRRFP1-201ENST00000435941 1675 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC073136.1-201ENST00000449426 2884 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RNU6-152P-201ENST00000384037 107 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 MIR589-201ENST00000385238 99 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RNA5SP339-201ENST00000390987 122 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RNA5SP178-201ENST00000410380 128 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL121878.1-201ENST00000418638 859 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 GNG5P5-201ENST00000420444 220 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL445528.1-201ENST00000426330 420 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC079807.1-201ENST00000429993 481 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL161722.2-201ENST00000434731 981 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RPL12P18-201ENST00000437175 325 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL354710.1-201ENST00000453641 246 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL133445.1-201ENST00000467051 452 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RN7SL809P-201ENST00000482040 297 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 MTATP6P1-201ENST00000514057 681 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC016550.3-201ENST00000515706 767 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC009852.2-201ENST00000567898 485 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC020978.7-201ENST00000575953 1187 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 SUGT1P3-202ENST00000604259 383 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AL589674.2-201ENST00000604304 337 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC073111.2-201ENST00000605657 1075 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 FRG1EP-201ENST00000634469 770 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 AC103703.1-201ENST00000634783 663 ntBASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDLIM5Q96HC4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 SNORA17A-201ENST00000391185 133 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL589655.1-201ENST00000405398 482 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 NCSTNP1-201ENST00000406229 144 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL390774.1-201ENST00000411924 246 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 RPL26P37-201ENST00000411983 438 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 NPM1P40-201ENST00000412758 733 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 RPL12P9-201ENST00000412942 488 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms