Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.33□□□□□ -1.72
USF2Q15853 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 RNA5SP433-201ENST00000364491 114 ntBASIC4.33□□□□□ -1.72
USF2Q15853 RNU6-1279P-201ENST00000383917 103 ntBASIC4.33□□□□□ -1.72
USF2Q15853 RPL21P67-201ENST00000402896 478 ntBASIC4.33□□□□□ -1.72
USF2Q15853 MIR1203-201ENST00000408812 85 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 MTCYBP7-201ENST00000419540 1134 ntBASIC4.33□□□□□ -1.72
USF2Q15853 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 DPY19L1P2-201ENST00000426647 915 ntBASIC4.33□□□□□ -1.72
USF2Q15853 HSPD1P12-201ENST00000429127 1069 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 AC069154.1-201ENST00000432914 542 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC092013.1-201ENST00000438795 332 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.33□□□□□ -1.72
USF2Q15853 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.33□□□□□ -1.72
USF2Q15853 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USF2Q15853 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
USF2Q15853 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.33□□□□□ -1.72
USF2Q15853 AC021193.1-201ENST00000511607 420 ntBASIC4.33□□□□□ -1.72
USF2Q15853 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.33□□□□□ -1.72
USF2Q15853 AC068305.2-201ENST00000550567 1205 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.33□□□□□ -1.72
USF2Q15853 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.33□□□□□ -1.72
USF2Q15853 NDUFA5P11-201ENST00000567995 343 ntBASIC4.33□□□□□ -1.72
USF2Q15853 MIR4311-201ENST00000580794 100 ntBASIC4.33□□□□□ -1.72
USF2Q15853 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 AC019131.2-201ENST00000609071 870 ntBASIC4.33□□□□□ -1.72
USF2Q15853 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.33□□□□□ -1.72
USF2Q15853 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.33□□□□□ -1.72
USF2Q15853 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
USF2Q15853 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
USF2Q15853 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
USF2Q15853 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC006206.1-201ENST00000544842 3387 ntBASIC4.32□□□□□ -1.72
USF2Q15853 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC079097.1-201ENST00000512187 1399 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AP001273.1-201ENST00000624493 3152 ntBASIC4.32□□□□□ -1.72
USF2Q15853 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 GAPDHP24-201ENST00000328713 983 ntBASIC4.32□□□□□ -1.72
USF2Q15853 Y_RNA.62-201ENST00000362840 99 ntBASIC4.32□□□□□ -1.72
USF2Q15853 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 SUGT1P2-201ENST00000379452 992 ntBASIC4.32□□□□□ -1.72
USF2Q15853 MT-TP-201ENST00000387461 68 ntBASIC4.32□□□□□ -1.72
USF2Q15853 RN7SKP125-201ENST00000410481 302 ntBASIC4.32□□□□□ -1.72
USF2Q15853 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.32□□□□□ -1.72
USF2Q15853 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.32□□□□□ -1.72
USF2Q15853 AC073464.3-201ENST00000422564 712 ntBASIC4.32□□□□□ -1.72
USF2Q15853 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USF2Q15853 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.32□□□□□ -1.72
USF2Q15853 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.32□□□□□ -1.72
USF2Q15853 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 AC021660.1-201ENST00000465006 554 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AP002884.1-201ENST00000479691 655 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AC022215.1-201ENST00000481770 362 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.32□□□□□ -1.72
USF2Q15853 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 NENFP3-201ENST00000503735 313 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.32□□□□□ -1.72
USF2Q15853 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC108471.1-201ENST00000513977 287 ntBASIC4.32□□□□□ -1.72
USF2Q15853 SEPT10P1-201ENST00000517342 1162 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AP000648.1-201ENST00000529682 397 ntBASIC4.32□□□□□ -1.72
USF2Q15853 OR5AM1P-201ENST00000532136 1032 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.32□□□□□ -1.72
USF2Q15853 AC087888.1-201ENST00000550884 1254 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.32□□□□□ -1.72
USF2Q15853 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.32□□□□□ -1.72
USF2Q15853 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC063977.5-201ENST00000601044 974 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AL031601.1-201ENST00000605702 394 ntBASIC4.32□□□□□ -1.72
USF2Q15853 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC000123.2-201ENST00000623124 461 ntBASIC4.32□□□□□ -1.72
USF2Q15853 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.32□□□□□ -1.72
USF2Q15853 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.32□□□□□ -1.72
USF2Q15853 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms