Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC026124.2-201ENST00000621847 656 ntBASIC5.28□□□□□ -1.56
SLC1A1P43005 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
SLC1A1P43005 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SLC1A1P43005 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SLC1A1P43005 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC1A1P43005 STX3-208ENST00000641815 3236 ntBASIC5.28□□□□□ -1.56
SLC1A1P43005 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC1A1P43005 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC1A1P43005 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC1A1P43005 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC1A1P43005 MIR323A-201ENST00000362199 86 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 SNORA73.1-201ENST00000363107 205 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC1A1P43005 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC1A1P43005 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC1A1P43005 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC1A1P43005 RN7SKP59-201ENST00000410520 314 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC1A1P43005 OR13Z1P-201ENST00000416141 834 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 TMBIM7P-201ENST00000418074 855 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 BX323845.1-201ENST00000432417 179 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AL691482.1-201ENST00000453255 87 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC1A1P43005 RNA5SP249-201ENST00000516127 99 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 RNA5SP303-201ENST00000516192 130 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC1A1P43005 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC1A1P43005 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC1A1P43005 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC233702.9-201ENST00000581528 203 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 AC016252.1-201ENST00000609721 474 ntBASIC5.27□□□□□ -1.57
SLC1A1P43005 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC1A1P43005 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 U3.2-201ENST00000362981 210 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 QRSL1P2-201ENST00000418582 964 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC1A1P43005 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC1A1P43005 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC1A1P43005 RN7SL517P-201ENST00000462240 305 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.26□□□□□ -1.57
SLC1A1P43005 RN7SL799P-201ENST00000475891 298 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 OR2AO1P-201ENST00000476497 403 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC112184.1-201ENST00000505179 312 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 RNA5SP362-201ENST00000516048 118 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 AC012339.2-201ENST00000523996 453 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC099494.2-201ENST00000623371 978 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC1A1P43005 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SLC1A1P43005 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC1A1P43005 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC1A1P43005 AC133552.1-201ENST00000569988 4007 ntBASIC5.26□□□□□ -1.57
SLC1A1P43005 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC1A1P43005 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC1A1P43005 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC1A1P43005 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.25□□□□□ -1.57
SLC1A1P43005 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC1A1P43005 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SLC1A1P43005 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC1A1P43005 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC1A1P43005 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC1A1P43005 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC1A1P43005 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms