Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC037198.3-201ENST00000616754 526 ntBASIC6.69□□□□□ -1.34
CNGA1P29973 AC009120.7-201ENST00000623452 780 ntBASIC6.69□□□□□ -1.34
CNGA1P29973 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.69□□□□□ -1.34
CNGA1P29973 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CNGA1P29973 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CNGA1P29973 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CNGA1P29973 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CNGA1P29973 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CNGA1P29973 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CNGA1P29973 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
CNGA1P29973 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CNGA1P29973 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CNGA1P29973 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 MSL3P1-202ENST00000440028 1468 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 AL590763.1-201ENST00000398297 1545 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 METTL21EP-201ENST00000298105 713 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CNGA1P29973 RNU6-452P-201ENST00000384406 107 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 RNU6-185P-201ENST00000384421 107 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AL603865.2-201ENST00000401679 213 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.68□□□□□ -1.34
CNGA1P29973 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 RN7SKP29-201ENST00000410957 272 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 RNA5SP498-201ENST00000411342 120 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.68□□□□□ -1.34
CNGA1P29973 LIPT1P1-201ENST00000415870 1186 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.68□□□□□ -1.34
CNGA1P29973 HMGB3P5-201ENST00000428894 612 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 RPS7P3-201ENST00000443360 580 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 AC020898.1-201ENST00000474167 787 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 UBA52P7-201ENST00000486088 380 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 OR7E157P-201ENST00000494376 911 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.68□□□□□ -1.34
CNGA1P29973 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.68□□□□□ -1.34
CNGA1P29973 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.68□□□□□ -1.34
CNGA1P29973 HMGB1P42-201ENST00000532126 553 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 AC084824.2-201ENST00000548906 345 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 AL132857.1-201ENST00000555180 708 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.68□□□□□ -1.34
CNGA1P29973 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 MTATP6P24-201ENST00000576835 677 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 SS18L2P2-201ENST00000583960 235 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.68□□□□□ -1.34
CNGA1P29973 AL157392.4-201ENST00000609756 345 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 FRG1HP-204ENST00000617940 757 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 AC008115.4-201ENST00000619780 775 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AC015660.5-201ENST00000623238 564 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 CU639417.4-201ENST00000623928 207 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.68□□□□□ -1.34
CNGA1P29973 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.68□□□□□ -1.34
CNGA1P29973 CASC19-248ENST00000641674 1356 ntBASIC6.68□□□□□ -1.34
CNGA1P29973 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CNGA1P29973 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNGA1P29973 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CNGA1P29973 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 U6.112-201ENST00000384129 70 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.67□□□□□ -1.34
CNGA1P29973 AL360271.1-201ENST00000395679 510 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 AL136131.1-201ENST00000406079 803 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.67□□□□□ -1.34
CNGA1P29973 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNGA1P29973 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.67□□□□□ -1.34
CNGA1P29973 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.67□□□□□ -1.34
CNGA1P29973 FMO7P-201ENST00000436045 768 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 TPTE2P3-201ENST00000441562 1189 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 HSFY3P-201ENST00000444242 1191 ntBASIC6.67□□□□□ -1.34
CNGA1P29973 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.67□□□□□ -1.34
CNGA1P29973 AC104164.1-201ENST00000460282 590 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms