Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF4P23510 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF4P23510 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC091305.2-201ENST00000624049 1576 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 CAP1P2-201ENST00000417455 1409 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 RNA5SP232-201ENST00000364144 119 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RNU4-28P-201ENST00000364739 141 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 MIR433-201ENST00000384837 93 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TNFSF4P23510 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF4P23510 MTCO2P21-201ENST00000419780 677 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 RPS26P47-201ENST00000427219 348 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 MTCO1P3-201ENST00000429327 192 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 EEF1B2P3-201ENST00000447718 678 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC118758.1-202ENST00000454719 225 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 RPL12P31-201ENST00000478433 450 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RPS3AP15-201ENST00000483874 781 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RPS27P23-201ENST00000487608 251 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 RPL7L1P4-201ENST00000513004 707 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RN7SKP67-201ENST00000515905 235 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RNA5SP228-201ENST00000516232 133 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 RNA5SP441-201ENST00000516809 88 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF4P23510 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF4P23510 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 MIR7109-201ENST00000613748 65 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 uc_338.29-201ENST00000615099 168 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 AC022905.1-201ENST00000503430 3048 ntBASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF4P23510 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TNFSF4P23510 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF4P23510 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF4P23510 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 SAMMSON-213ENST00000641336 1521 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL592429.1-201ENST00000403909 1473 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNFSF4P23510 RNU6-619P-201ENST00000365146 108 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 RNU6-178P-201ENST00000384631 104 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 SNORA40.2-201ENST00000390847 128 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 SFR1P1-201ENST00000403720 688 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 RNU6-272P-201ENST00000411028 104 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 MTATP6P17-201ENST00000431030 672 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms