Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RPS3AP14-201ENST00000483907 780 ntBASIC9.98□□□□□ -0.81
CHGAP10645 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.98□□□□□ -0.81
CHGAP10645 NIPA2P2-201ENST00000496376 1083 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC9.98□□□□□ -0.81
CHGAP10645 AC093664.1-201ENST00000511779 289 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.98□□□□□ -0.81
CHGAP10645 RNA5SP287-201ENST00000516358 103 ntBASIC9.98□□□□□ -0.81
CHGAP10645 RNA5SP278-201ENST00000517055 102 ntBASIC9.98□□□□□ -0.81
CHGAP10645 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 AC022832.1-201ENST00000530718 645 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC007068.2-201ENST00000543168 395 ntBASIC9.98□□□□□ -0.81
CHGAP10645 NXPE2P1-201ENST00000543705 726 ntBASIC9.98□□□□□ -0.81
CHGAP10645 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC9.98□□□□□ -0.81
CHGAP10645 AC005519.1-201ENST00000554490 601 ntBASIC9.98□□□□□ -0.81
CHGAP10645 WDR61-205ENST00000558459 884 ntTSL 3 BASIC9.98□□□□□ -0.81
CHGAP10645 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC9.98□□□□□ -0.81
CHGAP10645 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC9.98□□□□□ -0.81
CHGAP10645 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC9.98□□□□□ -0.81
CHGAP10645 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC9.98□□□□□ -0.81
CHGAP10645 AC073091.2-201ENST00000603205 907 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC012175.1-201ENST00000603755 531 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC011891.2-201ENST00000604949 397 ntBASIC9.98□□□□□ -0.81
CHGAP10645 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.98□□□□□ -0.81
CHGAP10645 AC061999.1-201ENST00000624454 177 ntBASIC9.98□□□□□ -0.81
CHGAP10645 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CHGAP10645 OR5BR1P-201ENST00000524992 1330 ntBASIC9.98□□□□□ -0.81
CHGAP10645 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.98□□□□□ -0.81
CHGAP10645 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC9.98□□□□□ -0.81
CHGAP10645 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CHGAP10645 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
CHGAP10645 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 LINC00663-203ENST00000586885 2546 ntBASIC9.97□□□□□ -0.81
CHGAP10645 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 RNA5SP172-201ENST00000365061 118 ntBASIC9.97□□□□□ -0.81
CHGAP10645 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
CHGAP10645 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
CHGAP10645 VIM2P-201ENST00000402383 1294 ntBASIC9.97□□□□□ -0.81
CHGAP10645 SNORA11B-201ENST00000408175 129 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AC007390.1-201ENST00000415722 356 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AC062016.2-201ENST00000420950 676 ntBASIC9.97□□□□□ -0.81
CHGAP10645 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC9.97□□□□□ -0.81
CHGAP10645 HSPD1P12-201ENST00000429127 1069 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AL121916.1-201ENST00000429405 308 ntBASIC9.97□□□□□ -0.81
CHGAP10645 USP9YP9-201ENST00000429406 715 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC9.97□□□□□ -0.81
CHGAP10645 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 AC099340.1-201ENST00000475247 599 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC9.97□□□□□ -0.81
CHGAP10645 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.97□□□□□ -0.81
CHGAP10645 AF131216.2-201ENST00000512316 564 ntBASIC9.97□□□□□ -0.81
CHGAP10645 RNA5SP216-201ENST00000516111 123 ntBASIC9.97□□□□□ -0.81
CHGAP10645 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 AC087477.6-201ENST00000559595 843 ntBASIC9.97□□□□□ -0.81
CHGAP10645 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC9.97□□□□□ -0.81
CHGAP10645 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC9.97□□□□□ -0.81
CHGAP10645 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 AC073592.6-201ENST00000624271 415 ntBASIC9.97□□□□□ -0.81
CHGAP10645 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CHGAP10645 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CHGAP10645 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC9.97□□□□□ -0.81
CHGAP10645 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHGAP10645 CA1-225ENST00000626824 2405 ntTSL 5 BASIC9.96□□□□□ -0.81
CHGAP10645 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CHGAP10645 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC9.96□□□□□ -0.81
CHGAP10645 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHGAP10645 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CHGAP10645 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHGAP10645 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
CHGAP10645 RNA5SP140-201ENST00000364524 92 ntBASIC9.96□□□□□ -0.82
CHGAP10645 RN7SKP269-201ENST00000365545 319 ntBASIC9.96□□□□□ -0.82
CHGAP10645 TINAG-203ENST00000370869 782 ntTSL 3 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms