Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC2.98□□□□□ -1.93
APOBP04114 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 AC017104.4-201ENST00000636283 1592 ntBASIC2.98□□□□□ -1.93
APOBP04114 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 SNORA9-201ENST00000384215 133 ntBASIC2.98□□□□□ -1.93
APOBP04114 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 F11-205ENST00000492972 1204 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 uc_338.7-201ENST00000621834 124 ntBASIC2.98□□□□□ -1.93
APOBP04114 AC011815.3-201ENST00000624194 473 ntBASIC2.98□□□□□ -1.93
APOBP04114 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 AC008758.3-201ENST00000507003 1829 ntBASIC2.98□□□□□ -1.93
APOBP04114 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC2.98□□□□□ -1.93
APOBP04114 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 SNORA70.10-201ENST00000384515 134 ntBASIC2.98□□□□□ -1.93
APOBP04114 ERG-202ENST00000398897 4651 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 RNU4-64P-201ENST00000410795 131 ntBASIC2.98□□□□□ -1.93
APOBP04114 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 AC009238.2-201ENST00000431026 355 ntBASIC2.98□□□□□ -1.93
APOBP04114 AL132765.1-201ENST00000434165 553 ntBASIC2.98□□□□□ -1.93
APOBP04114 FTH1P16-201ENST00000435241 552 ntBASIC2.98□□□□□ -1.93
APOBP04114 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.98□□□□□ -1.93
APOBP04114 AC108064.1-201ENST00000513791 460 ntBASIC2.98□□□□□ -1.93
APOBP04114 SNORA74D-201ENST00000516404 141 ntBASIC2.98□□□□□ -1.93
APOBP04114 MIR4420-201ENST00000583944 77 ntBASIC2.98□□□□□ -1.93
APOBP04114 AL133338.2-201ENST00000604292 736 ntBASIC2.98□□□□□ -1.93
APOBP04114 AC010424.2-201ENST00000607594 443 ntBASIC2.98□□□□□ -1.93
APOBP04114 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC2.98□□□□□ -1.93
APOBP04114 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBP04114 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 VN2R3P-201ENST00000422626 1412 ntBASIC2.97□□□□□ -1.93
APOBP04114 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
APOBP04114 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 AC002525.1-201ENST00000624392 1622 ntBASIC2.97□□□□□ -1.93
APOBP04114 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
APOBP04114 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 VN1R105P-201ENST00000486595 910 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC108475.1-201ENST00000507880 950 ntBASIC2.97□□□□□ -1.93
APOBP04114 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.97□□□□□ -1.93
APOBP04114 AC140479.6-201ENST00000633535 357 ntBASIC2.97□□□□□ -1.93
APOBP04114 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 TCP11X1-202ENST00000622971 1372 ntBASIC2.97□□□□□ -1.93
APOBP04114 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 AC093829.1-201ENST00000506662 1618 ntBASIC2.97□□□□□ -1.93
APOBP04114 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 RNA5SP130-201ENST00000364431 114 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC114755.2-201ENST00000413520 361 ntBASIC2.97□□□□□ -1.93
APOBP04114 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 AC079168.2-201ENST00000453977 416 ntBASIC2.97□□□□□ -1.93
APOBP04114 RNA5SP360-201ENST00000516555 118 ntBASIC2.97□□□□□ -1.93
APOBP04114 MTCYBP13-201ENST00000578634 1093 ntBASIC2.97□□□□□ -1.93
APOBP04114 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC023043.4-201ENST00000612081 449 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC244100.1-202ENST00000621554 382 ntBASIC2.97□□□□□ -1.93
APOBP04114 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
APOBP04114 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC2.97□□□□□ -1.93
APOBP04114 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC2.97□□□□□ -1.93
APOBP04114 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC2.97□□□□□ -1.93
APOBP04114 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms