Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 AC009509.4-201ENST00000619202 509 ntBASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 MRRFP1-201ENST00000435941 1675 ntBASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TMEM88BA6NKF7 AC092725.2-201ENST00000567658 1389 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RLIMP2-201ENST00000427891 1563 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 MIR217-201ENST00000384817 110 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 DPPA2P3-201ENST00000411853 655 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AL596448.1-201ENST00000415024 392 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RPS24P8-201ENST00000431490 402 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AL031667.1-201ENST00000440222 725 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 H2AFZP6-201ENST00000444403 394 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 OR4D12P-201ENST00000509361 911 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RNU6-405P-201ENST00000516637 110 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 OR4A21P-201ENST00000532759 944 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RN7SL475P-201ENST00000583379 298 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC037198.3-201ENST00000616754 526 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 U6.42-201ENST00000618440 107 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC015804.1-201ENST00000622935 435 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC073348.1-201ENST00000623002 331 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC016717.3-201ENST00000624730 554 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC025048.6-202ENST00000627667 438 ntBASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TMEM88BA6NKF7 AC079949.2-201ENST00000617117 2933 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 AC008627.1-201ENST00000517511 1704 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 OR13C1P-202ENST00000641378 2919 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 AL121657.1-201ENST00000327215 531 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 U3.7-201ENST00000363668 216 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 RNA5SP132-201ENST00000364725 118 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 RN7SKP62-201ENST00000384539 329 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 DEFB108C-201ENST00000400154 252 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 NCSTNP1-201ENST00000406229 144 ntBASIC7.58□□□□□ -1.2
TMEM88BA6NKF7 RPS3AP2-201ENST00000407190 754 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms