Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RN7SL516P-201ENST00000496127 297 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC008628.2-201ENST00000502605 298 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC098799.3-201ENST00000506095 438 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 RPL7L1P13-201ENST00000511702 739 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC114801.1-201ENST00000512633 297 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC138832.1-201ENST00000522871 556 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 OR6M2P-201ENST00000529831 871 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 EGLN3P1-201ENST00000541727 720 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 RAB11AP2-201ENST00000545905 639 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 DUX4L52-201ENST00000549363 777 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC004232.1-201ENST00000571388 208 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 RN7SL311P-201ENST00000579858 306 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC007497.1-201ENST00000610421 561 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC027807.2-201ENST00000616099 408 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 OR8G7P-201ENST00000616658 848 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC078909.2-201ENST00000620584 398 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AL353898.2-201ENST00000623000 255 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC018692.2-201ENST00000624130 348 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 AC015689.2-201ENST00000528172 1738 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 DCAF13P1-201ENST00000495256 1330 ntBASIC5.98□□□□□ -1.45
SHISA3A0PJX4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHISA3A0PJX4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 FAM32BP-201ENST00000344033 333 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RNA5SP65-201ENST00000363166 119 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 SNORA62.2-201ENST00000364672 152 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ARMCX7P-201ENST00000372828 562 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RNU6-723P-201ENST00000383973 107 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RPL39P6-201ENST00000448289 150 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RPL7P48-201ENST00000461513 746 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RPS3AP49-201ENST00000472161 790 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RPL7AP56-201ENST00000476420 791 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AP002884.1-201ENST00000479691 655 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RN7SL314P-201ENST00000490735 292 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 RNY4P37-201ENST00000516225 96 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MTCO2P4-201ENST00000517968 247 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms