Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC005000.1-201ENST00000536192 288 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 NMNAT1P1-201ENST00000554095 876 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AL049839.1-201ENST00000556151 657 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 U3.30-201ENST00000391308 210 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AL390316.1-201ENST00000406279 553 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 QRSL1P2-201ENST00000418582 964 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC117434.1-201ENST00000419971 836 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 H2AFZP6-201ENST00000444403 394 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC010733.1-201ENST00000451515 401 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 RN7SL738P-201ENST00000470264 297 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 CDH12P4-201ENST00000517835 295 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 CDH12P3-201ENST00000517935 295 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 CDH12P1-201ENST00000518435 295 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 MIR6810-201ENST00000622701 70 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC005261.6-201ENST00000623072 1387 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AP002530.1-201ENST00000405705 684 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 RPL37P18-201ENST00000411602 243 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 RPA2P2-201ENST00000419698 796 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 RPS29P9-201ENST00000440360 171 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC092905.1-201ENST00000467527 949 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 HMGN2P25-201ENST00000486956 268 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC022133.1-201ENST00000490961 571 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC079075.1-201ENST00000559543 878 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC018552.1-201ENST00000562099 811 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 AC008745.1-201ENST00000604064 271 ntBASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KIAA1549Q9HCM3 ECM1P2-201ENST00000503354 1577 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms