Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 SMG1P7-201ENST00000565246 2704 ntBASIC8.2□□□□□ -1.1
TOPBP1Q92547 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.2□□□□□ -1.1
TOPBP1Q92547 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC092681.1-201ENST00000297369 291 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 RPL23AP24-201ENST00000458203 385 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 IGKV3OR22-2-201ENST00000517943 313 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC108359.1-201ENST00000616451 1211 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.19□□□□□ -1.1
TOPBP1Q92547 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC017079.1-201ENST00000333650 415 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 GLUD1P9-201ENST00000420997 1173 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AL590399.2-201ENST00000427536 309 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 RPSAP51-201ENST00000497462 645 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC091868.1-201ENST00000508746 304 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 AC002044.3-201ENST00000623314 541 ntBASIC8.19□□□□□ -1.1
TOPBP1Q92547 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 AL117339.4-201ENST00000608335 7063 ntBASIC8.18□□□□□ -1.1
TOPBP1Q92547 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 AC004076.2-201ENST00000620532 3323 ntBASIC8.18□□□□□ -1.1
TOPBP1Q92547 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 RNU1-13P-201ENST00000384499 162 ntBASIC8.18□□□□□ -1.1
TOPBP1Q92547 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 CYCSP34-201ENST00000458172 304 ntBASIC8.18□□□□□ -1.1
TOPBP1Q92547 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.18□□□□□ -1.1
TOPBP1Q92547 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOPBP1Q92547 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AL122126.1-201ENST00000546905 1318 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 RNU6ATAC5P-201ENST00000388104 126 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC025750.1-201ENST00000399891 379 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 U3.32-201ENST00000408116 212 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC016772.1-201ENST00000444170 1261 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 RNU6ATAC28P-201ENST00000459249 118 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC026688.1-201ENST00000520639 1168 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC084783.1-201ENST00000565846 910 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 MIR4429-201ENST00000580105 73 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 ZYXP1-201ENST00000617638 118 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 RNF123-214ENST00000629802 207 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TOPBP1Q92547 AC008758.3-201ENST00000507003 1829 ntBASIC8.17□□□□□ -1.1
TOPBP1Q92547 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOPBP1Q92547 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOPBP1Q92547 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 AL731566.1-201ENST00000620490 1937 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TOPBP1Q92547 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms