Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC133552.3-201ENST00000572236 1869 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 SSXP3-201ENST00000442971 1300 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 PSMC1P7-201ENST00000495689 1315 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LINC02128-205ENST00000641755 1334 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-657P-201ENST00000383904 107 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 HMGB3P7-201ENST00000400214 611 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RN7SKP39-201ENST00000410773 322 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AL357752.1-201ENST00000412817 349 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC007394.1-201ENST00000421941 531 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RPL7P57-201ENST00000423238 740 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AL589872.1-201ENST00000426602 288 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RPEP2-201ENST00000432149 701 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RSU1P2-202ENST00000437884 485 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RPL22P17-201ENST00000438729 315 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC234771.3-201ENST00000454984 622 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC092569.1-201ENST00000455192 258 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 NUTF2P4-201ENST00000458353 381 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RNU7-136P-201ENST00000458819 69 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 FAM172BP-201ENST00000487497 1089 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 RPL7AP26-201ENST00000488538 813 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC008629.2-201ENST00000503783 483 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 HMGN1P13-201ENST00000505795 138 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC091839.1-201ENST00000513087 269 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC108471.1-201ENST00000513977 287 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC022832.1-201ENST00000530718 645 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 COX4I1P1-201ENST00000554239 509 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 FDPSP3-201ENST00000556903 1013 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 HSPE1P3-201ENST00000559254 309 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 MIR5010-201ENST00000582846 120 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC007621.1-201ENST00000604544 437 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC087623.4-201ENST00000606593 695 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC016999.2-201ENST00000614692 556 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC009268.2-201ENST00000621925 457 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 CASC19-221ENST00000641309 1382 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 THAP12P1-201ENST00000398672 2203 ntBASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
DEPDC4Q8N2C3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms