Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC010478.1-201ENST00000601500 6762 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 AC025031.4-201ENST00000621248 3271 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 OR5P1P-201ENST00000299512 925 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 RNA5SP119-201ENST00000362715 117 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 TMSB10P2-201ENST00000416049 131 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 FTH1P16-201ENST00000435241 552 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 RPL5P32-201ENST00000454085 879 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.97□□□□□ -1.93
HSPG2P98160 GAPDHP62-201ENST00000515313 990 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 TRAV8-5-201ENST00000537369 341 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC2.97□□□□□ -1.93
HSPG2P98160 PSMB7P1-201ENST00000556349 514 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 RN7SL652P-201ENST00000577769 300 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2.97□□□□□ -1.93
HSPG2P98160 AL356608.1-201ENST00000610034 820 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC010632.3-201ENST00000611377 369 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AL158152.1-201ENST00000602652 1435 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 SPRR2C-201ENST00000290702 219 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 RNA5SP345-201ENST00000410646 108 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 RNU6-628P-201ENST00000410675 107 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HSPG2P98160 YY1P1-201ENST00000427625 668 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC008481.1-201ENST00000463278 396 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 AC073137.1-201ENST00000605636 634 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 AC090017.1-201ENST00000548612 1779 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 AC079097.1-201ENST00000512187 1399 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 SNORD1C-201ENST00000363315 78 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 MIR2116-201ENST00000517221 80 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC079064.1-201ENST00000528365 362 ntBASIC2.97□□□□□ -1.93
HSPG2P98160 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HSPG2P98160 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HSPG2P98160 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
HSPG2P98160 AC138907.8-201ENST00000623981 2256 ntBASIC2.96□□□□□ -1.93
HSPG2P98160 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
HSPG2P98160 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC2.96□□□□□ -1.93
HSPG2P98160 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
HSPG2P98160 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HSPG2P98160 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC2.96□□□□□ -1.93
HSPG2P98160 HMGB3P5-201ENST00000428894 612 ntBASIC2.96□□□□□ -1.93
HSPG2P98160 LINC02210-201ENST00000444561 288 ntBASIC2.96□□□□□ -1.93
HSPG2P98160 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.96□□□□□ -1.93
HSPG2P98160 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.96□□□□□ -1.93
HSPG2P98160 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.96□□□□□ -1.93
HSPG2P98160 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
HSPG2P98160 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HSPG2P98160 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms