Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.11□□□□□ -1.59
SHOX2O60902 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.11□□□□□ -1.59
SHOX2O60902 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
SHOX2O60902 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHOX2O60902 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SHOX2O60902 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHOX2O60902 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHOX2O60902 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.1□□□□□ -1.59
SHOX2O60902 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 RANP7-201ENST00000418085 644 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 TDGF1P1-201ENST00000445734 527 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC073850.1-201ENST00000449243 255 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 PROS2P-201ENST00000474651 1951 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.1□□□□□ -1.59
SHOX2O60902 RPS4XP18-201ENST00000495480 763 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 ECM1P2-201ENST00000503354 1577 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.1□□□□□ -1.59
SHOX2O60902 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC006512.2-201ENST00000543250 486 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AC002310.3-201ENST00000569728 723 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AC005341.1-201ENST00000571086 708 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.1□□□□□ -1.59
SHOX2O60902 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.1□□□□□ -1.59
SHOX2O60902 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 AP005432.2-201ENST00000608162 586 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 SNX18P1Y-201ENST00000616231 511 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.1□□□□□ -1.59
SHOX2O60902 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.1□□□□□ -1.59
SHOX2O60902 AL512356.3-201ENST00000623005 461 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 CU639417.4-201ENST00000623928 207 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 AL390318.1-201ENST00000624564 687 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 OR8G3P-202ENST00000641572 1255 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SHOX2O60902 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHOX2O60902 SRRM1P3-201ENST00000426911 2678 ntBASIC5.1□□□□□ -1.59
SHOX2O60902 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 Z95331.1-201ENST00000623075 23112 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AL359922.3-201ENST00000624779 1670 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHOX2O60902 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHOX2O60902 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 DDX18P5-201ENST00000534547 1306 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.09□□□□□ -1.59
SHOX2O60902 SEPT7P2-202ENST00000398921 823 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 GAPDHP42-201ENST00000406848 981 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AL356968.2-201ENST00000412769 1257 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 SLC20A1P1-201ENST00000413906 956 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.09□□□□□ -1.59
SHOX2O60902 SRSF1P1-201ENST00000424058 520 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 FTLP19-201ENST00000433300 394 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AC110602.1-201ENST00000437414 318 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 GAPDHP25-201ENST00000447061 1001 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.09□□□□□ -1.59
SHOX2O60902 AC091180.1-201ENST00000462104 372 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 NENFP3-201ENST00000503735 313 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AC025458.1-201ENST00000506046 166 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.09□□□□□ -1.59
SHOX2O60902 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.09□□□□□ -1.59
SHOX2O60902 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.09□□□□□ -1.59
SHOX2O60902 YWHABP2-201ENST00000540201 713 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
SHOX2O60902 RPL26P30-202ENST00000602923 645 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 PPATP2-201ENST00000605635 508 ntBASIC5.09□□□□□ -1.59
SHOX2O60902 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.09□□□□□ -1.59
SHOX2O60902 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.59
SHOX2O60902 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHOX2O60902 OR14L1P-202ENST00000641545 3009 ntBASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms