Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NCOR1P3-201ENST00000420479 303 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 AL592293.2-201ENST00000422292 996 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 RPL35AP12-201ENST00000425362 338 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 DYNLL1P7-201ENST00000429273 258 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 OR2B7P-201ENST00000429302 934 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 PUDPP2-201ENST00000431423 643 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AC108059.2-201ENST00000434626 151 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 CBX1P1-201ENST00000440184 427 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 RPSAP48-201ENST00000466509 889 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 RN7SL153P-201ENST00000486501 292 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AC023194.1-201ENST00000493084 308 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 RN7SL775P-201ENST00000498361 336 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 RNA5SP518-201ENST00000515957 119 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 RN7SKP116-201ENST00000516902 319 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 AC040162.2-201ENST00000573092 157 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 MIR548Y-201ENST00000582739 110 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.92□□□□□ -1.14
HOXA2O43364 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 AC097468.3-201ENST00000607956 456 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 AC090971.5-201ENST00000621102 293 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXA2O43364 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXA2O43364 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXA2O43364 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.92□□□□□ -1.14
HOXA2O43364 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
HOXA2O43364 AF131215.2-201ENST00000531549 1710 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
HOXA2O43364 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HOXA2O43364 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HOXA2O43364 AC078795.1-201ENST00000602342 3143 ntBASIC7.92□□□□□ -1.14
HOXA2O43364 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 CKAP2P1-201ENST00000555477 2049 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXA2O43364 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXA2O43364 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 Y_RNA.474-201ENST00000384341 102 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXA2O43364 AL353193.1-201ENST00000421444 268 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXA2O43364 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 AC002504.1-201ENST00000438281 691 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 AC009237.4-201ENST00000441078 238 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXA2O43364 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
HOXA2O43364 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXA2O43364 RPLP0P1-201ENST00000457002 361 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXA2O43364 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXA2O43364 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXA2O43364 RPS16P9-201ENST00000477220 427 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 AC017015.1-201ENST00000477387 286 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 RPL23AP80-201ENST00000495605 424 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 AC098799.3-201ENST00000506095 438 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXA2O43364 RFPL4AP3-201ENST00000515267 345 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 SCARNA11.1-201ENST00000516918 132 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXA2O43364 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXA2O43364 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.91□□□□□ -1.14
HOXA2O43364 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXA2O43364 MIR4800-201ENST00000537353 80 ntBASIC7.91□□□□□ -1.14
HOXA2O43364 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms