Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 EIF4EP5-201ENST00000528228 640 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 OOSP1P2-201ENST00000579644 351 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AP001029.2-203ENST00000589795 4910 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AL078595.2-201ENST00000605309 1780 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC093297.3-201ENST00000607056 2517 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC099654.2-201ENST00000433031 1980 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 RPL7AP61-201ENST00000443410 636 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC097486.1-201ENST00000515331 210 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CDH12P4-201ENST00000517835 295 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CDH12P3-201ENST00000517935 295 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 CDH12P1-201ENST00000518435 295 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 MORF4L1P3-201ENST00000525966 950 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 MIR4737-201ENST00000583979 81 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 PRPF19P1-201ENST00000584766 898 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 RNA5SP439-201ENST00000617595 124 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AC009950.2-201ENST00000636548 183 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 ECM1P2-201ENST00000503354 1577 ntBASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMIM28A0A1B0GU29 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 GAPDHP15-201ENST00000398586 975 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 LRRC37BP1-201ENST00000398851 714 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 HYALP1-201ENST00000417674 1279 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AC093414.1-201ENST00000434712 514 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AL136455.1-201ENST00000441083 1240 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 PRPF38AP1-201ENST00000451976 933 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 CBX1P2-201ENST00000453841 458 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AC111000.5-201ENST00000506559 1178 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 OR7H2P-201ENST00000513483 306 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 TVP23CP2-201ENST00000571473 623 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AC018695.5-201ENST00000605872 315 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AC087821.1-201ENST00000623639 567 ntBASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMIM28A0A1B0GU29 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 OR4G1P-202ENST00000641173 1788 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms