Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AC005962.2-201ENST00000611427 652 ntBASIC7.62□□□□□ -1.19
SCAPERQ9BY12 MIR6853-201ENST00000619642 74 ntBASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AC006210.2-201ENST00000367074 1545 ntBASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AL590240.1-201ENST00000334118 313 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 RNA5SP515-201ENST00000364570 118 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 U3.28-201ENST00000391249 210 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC239367.2-201ENST00000447309 705 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 SLC25A18P1-201ENST00000449385 454 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 RN7SL443P-201ENST00000464331 290 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AL139041.1-201ENST00000605480 610 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AL139124.1-201ENST00000609123 421 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 ZNF652P1-201ENST00000442420 1309 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AL732292.1-201ENST00000426692 226 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 RPS29P9-201ENST00000440360 171 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 TXNP2-201ENST00000443918 295 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 PPIAP21-201ENST00000464473 501 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC013356.1-201ENST00000489027 564 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC025674.1-201ENST00000507074 324 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC093824.1-201ENST00000508796 343 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 HMGN1P9-201ENST00000515212 298 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC012339.2-201ENST00000523996 453 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 BNIP3P5-201ENST00000562290 498 ntBASIC7.61□□□□□ -1.19
SCAPERQ9BY12 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.61□□□□□ -1.19
SCAPERQ9BY12 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 AL137100.1-201ENST00000556703 1620 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 OR2B7P-201ENST00000429302 934 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 NDUFB4P8-201ENST00000435351 367 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 RPL23AP56-201ENST00000460778 453 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 PSAT1P4-201ENST00000466500 526 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 SCARNA22-201ENST00000503991 125 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 SEPT10P1-201ENST00000517342 1162 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 AC125494.2-201ENST00000602431 657 ntBASIC7.6□□□□□ -1.19
SCAPERQ9BY12 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCAPERQ9BY12 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 CASC19-260ENST00000641828 2001 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 IGBP1P4-201ENST00000503202 879 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AC026402.1-201ENST00000513642 170 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 ENPP7P9-201ENST00000514456 627 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 BNIP3P35-201ENST00000604530 490 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AL356218.2-201ENST00000605264 187 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 AL392048.1-201ENST00000613946 534 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms