Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC010487.1-201ENST00000594408 1172 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AP000864.1-201ENST00000609424 650 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AP005229.2-201ENST00000609980 697 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC004241.3-201ENST00000611728 517 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RN7SL544P-201ENST00000617232 284 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 RN7SL763P-201ENST00000620922 284 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AL049767.1-202ENST00000637826 242 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 AL022311.1-201ENST00000623726 19416 ntBASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHMP4CQ96CF2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC092451.3-201ENST00000625067 1343 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC004076.2-201ENST00000620532 3323 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC093591.2-201ENST00000565254 3843 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL159987.1-201ENST00000347911 293 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 HMGB1P10-201ENST00000395823 563 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 OR7E101P-201ENST00000400428 513 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC234781.4-201ENST00000419384 244 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 SFR1P2-201ENST00000421841 730 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 NDUFA5P10-201ENST00000432147 357 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC242426.1-201ENST00000435270 960 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC069277.2-201ENST00000454211 432 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 TVP23BP2-201ENST00000455082 615 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ATP5LP5-201ENST00000483050 299 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 RPS7P6-201ENST00000485777 579 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC009120.1-201ENST00000493458 473 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 NENFP3-201ENST00000503735 313 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 HAUS1P3-201ENST00000523909 662 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 HMGB1P42-201ENST00000532126 553 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC087888.1-201ENST00000550884 1254 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 DPPA2P4-201ENST00000563717 878 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 SNX6P1-201ENST00000601728 1224 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC084373.1-201ENST00000603311 235 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 RNA5SP440-201ENST00000612665 119 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL512624.1-201ENST00000613638 469 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC090607.5-201ENST00000615692 224 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL035661.1-201ENST00000620459 1144 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AL138820.1-201ENST00000617901 5305 ntBASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.76□□□□□ -1.33
CHMP4CQ96CF2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC007382.1-201ENST00000624376 2618 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC092681.1-201ENST00000297369 291 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL024507.1-201ENST00000412741 274 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 VN1R42P-201ENST00000424651 344 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC093716.1-201ENST00000435923 377 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 MTATP6P14-201ENST00000455189 673 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms