Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 U3.10-201ENST00000364459 214 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AMZ2P2-201ENST00000406819 1057 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AL450023.3-201ENST00000440592 271 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 OR4A2P-201ENST00000527276 913 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AF131215.7-201ENST00000602443 707 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC005261.4-201ENST00000600047 1385 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 RPL7P41-201ENST00000485823 957 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 MIR6839-201ENST00000620425 113 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 ATP5F1P3-201ENST00000397213 657 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC091390.3-201ENST00000426478 338 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 HSFY6P-201ENST00000445573 403 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC007016.1-201ENST00000512110 244 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 BUD31P1-201ENST00000521828 359 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC011477.5-201ENST00000586571 259 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AL022401.1-201ENST00000619498 108 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 SFTPD-AS1-201ENST00000608229 5001 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 AL117339.2-201ENST00000430475 180 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 RN7SL98P-201ENST00000462271 300 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 RNU6-709P-201ENST00000517257 104 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 CCNG2P1-201ENST00000549521 1000 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 AC034229.5-201ENST00000624258 185 ntBASIC3.93□□□□□ -1.78
VPS13CQ709C8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS13CQ709C8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS13CQ709C8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 OR1L6-202ENST00000373684 1044 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC090804.1-201ENST00000448870 490 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 TRAV8-5-201ENST00000537369 341 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SALL4P2-201ENST00000423288 2910 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SNORA70.10-201ENST00000384515 134 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 RN7SKP33-201ENST00000410942 340 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 CYCSP10-201ENST00000417973 294 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL358176.3-201ENST00000420757 454 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 IMPA1P1-201ENST00000510718 842 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 SNORA74D-201ENST00000516404 141 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms