Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 VDAC2P4-201ENST00000452925 711 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 DNAJB5P1-201ENST00000454004 806 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 SCARNA10-201ENST00000459255 330 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 VTA1P2-201ENST00000520205 911 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC026826.3-201ENST00000561747 158 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 AP001496.3-201ENST00000580230 913 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 PPATP2-201ENST00000605635 508 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 MIR6813-201ENST00000621638 56 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC008691.1-209ENST00000642094 814 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SPCS3P61009 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 SRRM1P3-201ENST00000426911 2678 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SPCS3P61009 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 MIR365B-201ENST00000362317 111 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 SEPT7P2-202ENST00000398921 823 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 MIR1275-201ENST00000408770 80 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 RPL36AP10-201ENST00000421785 322 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 FAM183DP-201ENST00000421987 399 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.31□□□□□ -1.72
SPCS3P61009 AL672138.1-201ENST00000450604 1015 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AL359839.1-201ENST00000451975 1160 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 LRRC37A14P-201ENST00000452297 462 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC093827.1-201ENST00000480094 861 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 RN7SL273P-201ENST00000481561 299 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 RPL15P21-201ENST00000495592 567 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 Vault.2-201ENST00000516519 98 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 SCARNA16.4-201ENST00000516956 187 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC006512.2-201ENST00000543250 486 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.31□□□□□ -1.72
SPCS3P61009 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.31□□□□□ -1.72
SPCS3P61009 MRPS21P7-201ENST00000566937 238 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC092121.1-201ENST00000569452 202 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC004948.1-201ENST00000609858 672 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 SAMMSON-209ENST00000641222 1100 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.31□□□□□ -1.72
SPCS3P61009 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
SPCS3P61009 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPCS3P61009 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 AC090181.3-201ENST00000624777 1514 ntBASIC4.31□□□□□ -1.72
SPCS3P61009 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.31□□□□□ -1.72
SPCS3P61009 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.3□□□□□ -1.72
SPCS3P61009 USP9YP4-201ENST00000424401 1745 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 MAPK10-320ENST00000641462 6696 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.3□□□□□ -1.72
SPCS3P61009 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 RNU4-2-201ENST00000365668 141 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 GCNT6-201ENST00000379591 934 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 AC004386.1-201ENST00000393214 761 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 HMGB1P20-201ENST00000402555 677 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 AC245060.4-201ENST00000413293 1121 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 AC009237.10-201ENST00000414112 510 ntBASIC4.3□□□□□ -1.72
SPCS3P61009 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPCS3P61009 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.3□□□□□ -1.72
SPCS3P61009 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms