Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE4BO95155 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.68□□□□□ -1.5
UBE4BO95155 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE4BO95155 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE4BO95155 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE4BO95155 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE4BO95155 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE4BO95155 LSM1P2-201ENST00000604911 322 ntBASIC5.68□□□□□ -1.5
UBE4BO95155 RPSAP73-201ENST00000614820 330 ntBASIC5.68□□□□□ -1.5
UBE4BO95155 AC108359.1-201ENST00000616451 1211 ntBASIC5.68□□□□□ -1.5
UBE4BO95155 FRG1EP-201ENST00000634469 770 ntBASIC5.68□□□□□ -1.5
UBE4BO95155 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE4BO95155 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE4BO95155 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE4BO95155 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE4BO95155 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 PABPC1P6-201ENST00000445594 1829 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE4BO95155 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE4BO95155 DUTP5-201ENST00000406790 469 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE4BO95155 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE4BO95155 DPPA2P2-201ENST00000418220 897 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 AC245047.2-201ENST00000441060 530 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 CYCSP24-201ENST00000445119 316 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE4BO95155 AC020779.1-201ENST00000478757 796 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 RFPL4AP3-201ENST00000515267 345 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE4BO95155 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE4BO95155 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
UBE4BO95155 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE4BO95155 CUL4AP1-201ENST00000514750 1863 ntBASIC5.67□□□□□ -1.5
UBE4BO95155 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UBE4BO95155 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE4BO95155 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE4BO95155 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE4BO95155 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBE4BO95155 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UBE4BO95155 RN7SKP113-201ENST00000363891 295 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 MIR600-201ENST00000385007 98 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 AL163193.1-201ENST00000444895 788 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 AL389915.2-201ENST00000454576 441 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 RN7SL441P-201ENST00000492388 296 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC113398.2-201ENST00000507630 558 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.66□□□□□ -1.5
UBE4BO95155 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE4BO95155 AP005901.4-201ENST00000577336 569 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 AC127024.5-201ENST00000580085 462 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
UBE4BO95155 OR8G7P-201ENST00000616658 848 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 AC011503.2-201ENST00000594230 1500 ntBASIC5.66□□□□□ -1.5
UBE4BO95155 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
UBE4BO95155 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE4BO95155 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE4BO95155 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE4BO95155 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE4BO95155 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UBE4BO95155 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
UBE4BO95155 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UBE4BO95155 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
UBE4BO95155 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE4BO95155 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms