Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC090502.2-201ENST00000549267 280 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 RN7SL426P-201ENST00000579106 295 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 DPPA3P3-201ENST00000603842 430 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 AC087623.4-201ENST00000606593 695 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 AL022345.1-201ENST00000607292 135 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 AL121782.1-201ENST00000611242 413 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 CASC19-232ENST00000641480 1244 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 MTND4P35-201ENST00000604257 1375 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 RNF6P1-201ENST00000444889 1784 ntBASIC7.91□□□□□ -1.14
PHOX2BQ99453 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PHOX2BQ99453 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 RNU6-1097P-201ENST00000363586 107 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 Y_RNA.259-201ENST00000364619 101 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AL161631.1-201ENST00000417933 486 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 MTCO3P21-201ENST00000430791 643 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 RPL7P39-201ENST00000481157 744 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC108688.1-201ENST00000485817 713 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 RN7SL655P-201ENST00000486087 298 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 TMEM248P1-201ENST00000510579 951 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 Y_RNA.711-201ENST00000516993 102 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC022616.6-201ENST00000520479 119 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 BNIP3P6-201ENST00000549284 499 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC089984.3-201ENST00000552838 363 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 MIR4271-201ENST00000582451 67 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.9□□□□□ -1.14
PHOX2BQ99453 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 AC009318.4-201ENST00000620496 486 ntBASIC7.9□□□□□ -1.14
PHOX2BQ99453 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PHOX2BQ99453 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.9□□□□□ -1.15
PHOX2BQ99453 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.9□□□□□ -1.15
PHOX2BQ99453 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
PHOX2BQ99453 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
PHOX2BQ99453 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PHOX2BQ99453 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
PHOX2BQ99453 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PHOX2BQ99453 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PHOX2BQ99453 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PHOX2BQ99453 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms