Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RPL23AP61-201ENST00000623642 466 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH13P55290 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 AC007342.7-201ENST00000624610 2337 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH13P55290 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
CDH13P55290 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 AC007342.5-201ENST00000571340 2142 ntBASIC5.26□□□□□ -1.57
CDH13P55290 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH13P55290 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 RLIMP2-201ENST00000427891 1563 ntBASIC5.25□□□□□ -1.57
CDH13P55290 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 DBIP1-201ENST00000401435 260 ntBASIC5.25□□□□□ -1.57
CDH13P55290 VN1R12P-201ENST00000403778 876 ntBASIC5.25□□□□□ -1.57
CDH13P55290 SLC20A1P1-201ENST00000413906 956 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AL121878.1-201ENST00000418638 859 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC093155.2-201ENST00000420734 937 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH13P55290 AL390879.2-203ENST00000426943 1121 ntBASIC5.25□□□□□ -1.57
CDH13P55290 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 MTND2P21-201ENST00000436242 1042 ntBASIC5.25□□□□□ -1.57
CDH13P55290 OR52E3P-201ENST00000452083 936 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC093663.2-201ENST00000484625 313 ntBASIC5.25□□□□□ -1.57
CDH13P55290 OR9N1P-202ENST00000494289 481 ntBASIC5.25□□□□□ -1.57
CDH13P55290 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 AP004607.2-201ENST00000533949 322 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC087888.1-201ENST00000550884 1254 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 CKS1BP1-201ENST00000555221 240 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 RPL21P136-201ENST00000605378 396 ntBASIC5.25□□□□□ -1.57
CDH13P55290 FAM72A-208ENST00000607379 1139 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AL365181.4-201ENST00000609800 547 ntBASIC5.25□□□□□ -1.57
CDH13P55290 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 AL096712.1-201ENST00000614561 159 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH13P55290 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH13P55290 AC073869.7-201ENST00000640874 297 ntBASIC5.25□□□□□ -1.57
CDH13P55290 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.25□□□□□ -1.57
CDH13P55290 AC079298.1-201ENST00000625026 1619 ntBASIC5.25□□□□□ -1.57
CDH13P55290 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.25□□□□□ -1.57
CDH13P55290 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH13P55290 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH13P55290 AP005432.1-201ENST00000580891 3485 ntBASIC5.25□□□□□ -1.57
CDH13P55290 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH13P55290 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH13P55290 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 SMG1P7-201ENST00000565246 2704 ntBASIC5.24□□□□□ -1.57
CDH13P55290 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH13P55290 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH13P55290 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH13P55290 AC104297.1-201ENST00000393779 870 ntBASIC5.24□□□□□ -1.57
CDH13P55290 Z86062.1-201ENST00000406773 777 ntBASIC5.24□□□□□ -1.57
CDH13P55290 SNORA79B-201ENST00000410557 148 ntBASIC5.24□□□□□ -1.57
CDH13P55290 HMGN1P20-201ENST00000411849 300 ntBASIC5.24□□□□□ -1.57
CDH13P55290 OR6E1P-201ENST00000414424 923 ntBASIC5.24□□□□□ -1.57
CDH13P55290 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 HSPD1P12-201ENST00000429127 1069 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms