Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.48□□□□□ -1.37
COL18A1P39060 H3F3BP1-201ENST00000440551 403 ntBASIC6.48□□□□□ -1.37
COL18A1P39060 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.48□□□□□ -1.37
COL18A1P39060 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.48□□□□□ -1.37
COL18A1P39060 AC021193.1-201ENST00000511607 420 ntBASIC6.48□□□□□ -1.37
COL18A1P39060 AC092709.1-201ENST00000521355 1045 ntBASIC6.48□□□□□ -1.37
COL18A1P39060 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.48□□□□□ -1.37
COL18A1P39060 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.48□□□□□ -1.37
COL18A1P39060 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
COL18A1P39060 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL18A1P39060 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL18A1P39060 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
COL18A1P39060 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL18A1P39060 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.47□□□□□ -1.37
COL18A1P39060 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.47□□□□□ -1.37
COL18A1P39060 AC109327.1-201ENST00000471666 403 ntBASIC6.47□□□□□ -1.37
COL18A1P39060 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.47□□□□□ -1.37
COL18A1P39060 AC022726.1-201ENST00000587475 207 ntBASIC6.47□□□□□ -1.37
COL18A1P39060 MIR6830-201ENST00000636015 70 ntBASIC6.47□□□□□ -1.37
COL18A1P39060 AC000095.2-202ENST00000637415 154 ntBASIC6.47□□□□□ -1.37
COL18A1P39060 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.47□□□□□ -1.37
COL18A1P39060 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL18A1P39060 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.47□□□□□ -1.37
COL18A1P39060 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL18A1P39060 AC009951.1-201ENST00000623674 2614 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 SNORA48.4-201ENST00000391089 134 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.46□□□□□ -1.37
COL18A1P39060 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.46□□□□□ -1.37
COL18A1P39060 NPM1P33-201ENST00000438918 872 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 AC079168.2-201ENST00000453977 416 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.46□□□□□ -1.37
COL18A1P39060 BUD31P1-201ENST00000521828 359 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL18A1P39060 AC022884.2-201ENST00000578535 580 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 AC067959.1-201ENST00000604334 379 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.46□□□□□ -1.37
COL18A1P39060 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL18A1P39060 AC068446.1-201ENST00000556425 1549 ntBASIC6.46□□□□□ -1.37
COL18A1P39060 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 RBPJP2-201ENST00000618187 1444 ntBASIC6.46□□□□□ -1.38
COL18A1P39060 CASC19-260ENST00000641828 2001 ntBASIC6.46□□□□□ -1.38
COL18A1P39060 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.46□□□□□ -1.38
COL18A1P39060 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL18A1P39060 AL359265.1-201ENST00000440296 795 ntBASIC6.46□□□□□ -1.38
COL18A1P39060 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.46□□□□□ -1.38
COL18A1P39060 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.46□□□□□ -1.38
COL18A1P39060 RN7SL290P-201ENST00000578661 300 ntBASIC6.46□□□□□ -1.38
COL18A1P39060 AL109618.2-201ENST00000605527 211 ntBASIC6.46□□□□□ -1.38
COL18A1P39060 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
COL18A1P39060 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL18A1P39060 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.46□□□□□ -1.38
COL18A1P39060 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.45□□□□□ -1.38
COL18A1P39060 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL18A1P39060 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL18A1P39060 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL18A1P39060 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL18A1P39060 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL18A1P39060 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL18A1P39060 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 MIR1193-201ENST00000408109 78 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 AC006065.1-201ENST00000422539 802 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.45□□□□□ -1.38
COL18A1P39060 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.45□□□□□ -1.38
COL18A1P39060 AC073052.1-201ENST00000440417 714 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.45□□□□□ -1.38
COL18A1P39060 CYCSP29-201ENST00000533731 318 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.45□□□□□ -1.38
COL18A1P39060 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.45□□□□□ -1.38
COL18A1P39060 AL020997.2-201ENST00000602607 184 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 AL162574.1-201ENST00000615702 950 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 AL121890.3-201ENST00000618494 516 ntBASIC6.45□□□□□ -1.38
COL18A1P39060 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms