Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD4P09016 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD4P09016 HMGB1P44-201ENST00000508597 572 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD4P09016 SCARNA16.4-201ENST00000516956 187 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 IGLV3-24-201ENST00000517477 197 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD4P09016 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD4P09016 BLZF2P-201ENST00000553776 1130 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD4P09016 RN7SL708P-201ENST00000580952 299 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD4P09016 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD4P09016 AL445222.1-201ENST00000607259 628 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 RNU6-84P-201ENST00000607737 102 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXD4P09016 AC000068.2-201ENST00000608816 460 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXD4P09016 AC016911.1-201ENST00000613297 452 ntBASIC4.94□□□□□ -1.62
HOXD4P09016 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
HOXD4P09016 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXD4P09016 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD4P09016 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD4P09016 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD4P09016 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 RNA5SP335-201ENST00000363817 110 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXD4P09016 MIR550A3-201ENST00000390735 95 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 RN7SKP216-201ENST00000411050 312 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC002524.1-201ENST00000411687 547 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 GABARAPL3-201ENST00000412799 354 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC007161.1-204ENST00000423039 460 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC005033.1-201ENST00000428904 813 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 FAM96AP1-201ENST00000430879 482 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 OR52B5P-201ENST00000435337 951 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AL772161.1-201ENST00000439130 476 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD4P09016 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 AL672138.1-201ENST00000450604 1015 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 SNORD125-201ENST00000459538 96 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AP000942.1-201ENST00000463969 747 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 PSAT1P4-201ENST00000466500 526 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 RN7SL222P-201ENST00000476452 299 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 RN7SL346P-201ENST00000491561 294 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC092593.2-201ENST00000513866 913 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AL671862.1-201ENST00000515851 349 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 SNORA26.10-201ENST00000516427 141 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC087272.1-201ENST00000523624 533 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 HMGB1P40-201ENST00000525121 540 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC025857.1-201ENST00000525252 377 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC084824.2-201ENST00000548906 345 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC126177.5-201ENST00000549599 178 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 DHFRP1-201ENST00000579682 559 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD4P09016 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXD4P09016 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 OR52B5P-202ENST00000641118 1110 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HOXD4P09016 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 AL731532.2-201ENST00000623542 1953 ntBASIC4.93□□□□□ -1.62
HOXD4P09016 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD4P09016 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXD4P09016 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD4P09016 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD4P09016 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXD4P09016 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HOXD4P09016 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXD4P09016 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD4P09016 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HOXD4P09016 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXD4P09016 AC103591.2-201ENST00000265259 766 ntBASIC4.92□□□□□ -1.62
HOXD4P09016 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD4P09016 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXD4P09016 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXD4P09016 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
HOXD4P09016 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXD4P09016 SNORA67-201ENST00000384423 137 ntBASIC4.92□□□□□ -1.62
HOXD4P09016 RNU1-77P-201ENST00000390868 162 ntBASIC4.92□□□□□ -1.62
HOXD4P09016 Y_RNA.625-201ENST00000411256 107 ntBASIC4.92□□□□□ -1.62
HOXD4P09016 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms