Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 OR2AM1P-201ENST00000422137 422 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC104837.2-201ENST00000427236 424 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 MTND2P40-201ENST00000436718 841 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 Z80107.2-201ENST00000445127 392 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 RPS3AP53-201ENST00000454716 778 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 COX6B1P5-201ENST00000509843 249 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 RNA5SP43-201ENST00000516559 110 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 OR7E128P-201ENST00000532736 1024 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 MIR3934-201ENST00000579806 107 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC091953.3-201ENST00000623220 236 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC112694.2-201ENST00000623697 768 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC116158.1-201ENST00000560231 2129 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC007996.1-201ENST00000620414 2821 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 RNA5SP223-201ENST00000365174 120 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AL353625.1-202ENST00000366273 571 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 SNORA66-201ENST00000384792 133 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 CHEK2P3-201ENST00000416118 248 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 DPPA2P2-201ENST00000418220 897 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AL772161.1-201ENST00000439130 476 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC108751.3-201ENST00000461814 1020 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC083982.1-201ENST00000485679 344 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC010350.1-201ENST00000504908 231 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC092709.1-201ENST00000521355 1045 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 BRD9P1-201ENST00000529855 560 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC016839.1-201ENST00000578162 867 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 LSM1P2-201ENST00000604911 322 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AL162574.1-201ENST00000615702 950 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 IRF5P1-201ENST00000504852 2164 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 CASC19-221ENST00000641309 1382 ntBASIC5.54□□□□□ -1.52
NXF3Q9H4D5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NXF3Q9H4D5 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 RN7SKP103-201ENST00000363848 320 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 NPM1P37-201ENST00000403105 874 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AL139128.1-201ENST00000413921 941 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AL354766.1-201ENST00000423396 542 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 IGLV2-34-201ENST00000490007 283 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.53□□□□□ -1.52
NXF3Q9H4D5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.53□□□□□ -1.52
NXF3Q9H4D5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms