Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL512356.3-201ENST00000623005 461 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC006210.2-201ENST00000367074 1545 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC073136.1-201ENST00000449426 2884 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL731566.1-201ENST00000620490 1937 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP242-201ENST00000364171 118 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RNU1-74P-201ENST00000384108 171 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RNU1-149P-201ENST00000390870 161 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 OR3A2-201ENST00000408891 1076 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 TMX2P1-201ENST00000436507 708 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 BX842559.2-201ENST00000451418 605 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RPL7P6-201ENST00000480903 738 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC108693.1-201ENST00000496068 432 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC104109.1-201ENST00000498563 436 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 BX510359.5-201ENST00000515651 304 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 HMGB1P19-201ENST00000517578 577 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC012400.1-201ENST00000518452 381 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RPL10P14-201ENST00000565265 298 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC127024.5-201ENST00000580085 462 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 MIR4310-201ENST00000582950 57 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AL359513.1-201ENST00000614364 557 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 MIR6837-201ENST00000620884 64 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 MTCO1P1-201ENST00000624263 1081 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 MTCO1P15-201ENST00000529569 1526 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 AC120338.1-201ENST00000625074 1541 ntBASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.14□□□□□ -1.75
TTC9CQ8N5M4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC092747.4-201ENST00000620519 1861 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AL034549.2-201ENST00000618285 3373 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP223-201ENST00000365174 120 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 SNORA67-201ENST00000384423 137 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 PRPF38AP1-201ENST00000451976 933 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC002553.2-201ENST00000453217 340 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RPL7P39-201ENST00000481157 744 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RPS4XP20-201ENST00000505751 772 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RNU6-941P-201ENST00000516346 108 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC040958.1-201ENST00000561102 201 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC022884.2-201ENST00000578535 580 ntBASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TTC9CQ8N5M4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms