Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 RPS7P10-201ENST00000464254 603 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 SNRPCP11-201ENST00000492453 205 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC080014.1-201ENST00000496877 1201 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 OR4D12P-201ENST00000509361 911 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 RNA5SP116-201ENST00000516132 98 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC109635.6-201ENST00000525487 1113 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.55□□□□□ -1.52
CLRN1P58418 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC025260.1-201ENST00000548858 430 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.55□□□□□ -1.52
CLRN1P58418 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.55□□□□□ -1.52
CLRN1P58418 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.55□□□□□ -1.52
CLRN1P58418 MIR3157-201ENST00000578688 85 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AP001094.1-201ENST00000579805 193 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC027229.1-201ENST00000583887 253 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC063977.7-201ENST00000594454 337 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC012368.3-201ENST00000604190 219 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC009163.6-201ENST00000612367 342 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC007342.8-201ENST00000623278 678 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 TTC39DP-201ENST00000416781 1688 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 AC138393.1-206ENST00000540997 1886 ntBASIC5.55□□□□□ -1.52
CLRN1P58418 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.55□□□□□ -1.52
CLRN1P58418 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLRN1P58418 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLRN1P58418 AC096921.2-201ENST00000561507 1916 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC245100.2-201ENST00000454544 1679 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 Y_RNA.77-201ENST00000362962 107 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RNU6-553P-201ENST00000364047 96 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RNU6-304P-201ENST00000364855 107 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RNA5SP77-201ENST00000365394 120 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 RPS3AP26-201ENST00000398259 784 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 PSMA6P1-201ENST00000400275 741 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AL590084.2-201ENST00000401481 382 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 NACAP7-201ENST00000407371 609 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RN7SKP121-201ENST00000410842 305 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RN7SKP144-201ENST00000411108 279 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC007562.1-201ENST00000421819 517 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 OR5AW1P-201ENST00000426334 1006 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 DLGAP5P1-201ENST00000430307 464 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC098826.1-201ENST00000433943 471 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AL353093.1-201ENST00000441292 436 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC023274.2-201ENST00000445264 521 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLRN1P58418 ELOCP30-201ENST00000447108 299 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 MTND2P19-201ENST00000449129 1012 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 MTND1P27-201ENST00000451117 902 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC097262.1-201ENST00000452559 548 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RPS27AP3-201ENST00000453803 454 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC091959.2-201ENST00000477363 321 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 RPL12P31-201ENST00000478433 450 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC021146.8-201ENST00000507455 733 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 KHDC1P1-201ENST00000511053 508 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms