Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
LIMK2P53671 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.35□□□□□ -1.55
LIMK2P53671 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK2P53671 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LIMK2P53671 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 AP005435.3-201ENST00000531260 3198 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 AC005294.1-201ENST00000355509 281 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 RN7SKP153-201ENST00000365026 316 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AL390774.1-201ENST00000411924 246 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK2P53671 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK2P53671 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 AL133325.1-201ENST00000421090 382 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 CLUHP1-201ENST00000435012 1190 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK2P53671 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK2P53671 EEF1B2P5-201ENST00000444820 548 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK2P53671 RPS26P41-201ENST00000450370 284 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 SBDSP1-204ENST00000453858 737 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC021660.1-201ENST00000465006 554 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC005532.2-201ENST00000467154 373 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC004815.1-201ENST00000484185 331 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 RN7SL814P-201ENST00000487715 300 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC022133.1-201ENST00000490961 571 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 HMGB1P44-201ENST00000508597 572 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 SCARNA16.4-201ENST00000516956 187 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK2P53671 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK2P53671 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.34□□□□□ -1.55
LIMK2P53671 AC126177.5-201ENST00000549599 178 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK2P53671 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK2P53671 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK2P53671 MIR7155-201ENST00000615925 56 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 AC107905.1-201ENST00000616204 426 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK2P53671 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.34□□□□□ -1.55
LIMK2P53671 AC010266.2-201ENST00000564741 3255 ntBASIC5.34□□□□□ -1.55
LIMK2P53671 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.34□□□□□ -1.56
LIMK2P53671 MRRFP1-201ENST00000435941 1675 ntBASIC5.34□□□□□ -1.56
LIMK2P53671 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
LIMK2P53671 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LIMK2P53671 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK2P53671 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 RNA5SP335-201ENST00000363817 110 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 RPL21P67-201ENST00000402896 478 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 RPS20P25-201ENST00000412447 352 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 SRSF1P1-201ENST00000424058 520 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 NOP56P2-201ENST00000447491 769 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK2P53671 RN7SL447P-201ENST00000494711 245 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC072052.1-201ENST00000496556 306 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC008953.1-201ENST00000497334 318 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 MYL12BP2-201ENST00000503948 512 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.33□□□□□ -1.56
LIMK2P53671 AP004607.2-201ENST00000533949 322 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK2P53671 BLZF2P-201ENST00000553776 1130 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK2P53671 AC127024.5-201ENST00000580085 462 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AP000919.1-201ENST00000582850 985 ntBASIC5.33□□□□□ -1.56
LIMK2P53671 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK2P53671 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK2P53671 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK2P53671 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK2P53671 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK2P53671 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK2P53671 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK2P53671 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LIMK2P53671 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK2P53671 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LIMK2P53671 SMG1P7-201ENST00000565246 2704 ntBASIC5.32□□□□□ -1.56
LIMK2P53671 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
LIMK2P53671 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK2P53671 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK2P53671 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms