Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.54□□□□□ -1.52
APOA4P06727 AC091912.1-201ENST00000511351 248 ntBASIC5.54□□□□□ -1.52
APOA4P06727 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.54□□□□□ -1.52
APOA4P06727 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
APOA4P06727 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 MRE11P1-201ENST00000464884 2127 ntBASIC5.54□□□□□ -1.52
APOA4P06727 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.54□□□□□ -1.52
APOA4P06727 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 AC093591.2-201ENST00000565254 3843 ntBASIC5.53□□□□□ -1.52
APOA4P06727 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 AC007382.1-201ENST00000624376 2618 ntBASIC5.53□□□□□ -1.52
APOA4P06727 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 OR13C1P-202ENST00000641378 2919 ntBASIC5.53□□□□□ -1.52
APOA4P06727 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 U3.7-201ENST00000363668 216 ntBASIC5.53□□□□□ -1.52
APOA4P06727 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
APOA4P06727 SNORA48.4-201ENST00000391089 134 ntBASIC5.53□□□□□ -1.52
APOA4P06727 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.53□□□□□ -1.52
APOA4P06727 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 RPL23AP19-201ENST00000436229 369 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 AL450996.1-201ENST00000445574 1202 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AL513343.1-201ENST00000451818 792 ntBASIC5.53□□□□□ -1.52
APOA4P06727 MTND2P3-201ENST00000452458 470 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AL358876.1-201ENST00000453364 1075 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 UBFD1P1-201ENST00000473259 814 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC021106.1-201ENST00000509020 1058 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC021193.1-201ENST00000511607 420 ntBASIC5.53□□□□□ -1.52
APOA4P06727 SNORA43.3-201ENST00000517240 103 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 AC138832.1-201ENST00000522871 556 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 HSPE1P2-201ENST00000554777 306 ntBASIC5.53□□□□□ -1.52
APOA4P06727 NMNAT1P5-201ENST00000559657 841 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.53□□□□□ -1.52
APOA4P06727 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 AC027243.2-201ENST00000602530 724 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AL137072.1-201ENST00000603444 466 ntBASIC5.53□□□□□ -1.52
APOA4P06727 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.53□□□□□ -1.52
APOA4P06727 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 AL162233.1-201ENST00000620014 944 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AP001962.1-201ENST00000624114 559 ntBASIC5.53□□□□□ -1.52
APOA4P06727 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 DDX6P1-205ENST00000441966 1436 ntBASIC5.53□□□□□ -1.52
APOA4P06727 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
APOA4P06727 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 AC018809.2-201ENST00000602436 3823 ntBASIC5.53□□□□□ -1.52
APOA4P06727 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.53□□□□□ -1.52
APOA4P06727 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOA4P06727 AC104964.3-201ENST00000606115 2860 ntBASIC5.53□□□□□ -1.52
APOA4P06727 SRRM1P3-201ENST00000426911 2678 ntBASIC5.52□□□□□ -1.53
APOA4P06727 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.52□□□□□ -1.53
APOA4P06727 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOA4P06727 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.52□□□□□ -1.53
APOA4P06727 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOA4P06727 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOA4P06727 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APOA4P06727 MUC2-202ENST00000613187 4845 ntBASIC5.52□□□□□ -1.53
APOA4P06727 GAPDHP24-201ENST00000328713 983 ntBASIC5.52□□□□□ -1.53
APOA4P06727 GAPDHP42-201ENST00000406848 981 ntBASIC5.52□□□□□ -1.53
APOA4P06727 GABARAPL3-201ENST00000412799 354 ntBASIC5.52□□□□□ -1.53
APOA4P06727 SDHDP6-201ENST00000414693 480 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms