Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
SOX1O00570 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX1O00570 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX1O00570 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 CASC19-206ENST00000641028 1430 ntBASIC7.03□□□□□ -1.28
SOX1O00570 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 COL6A4P1-202ENST00000487147 4317 ntBASIC7.03□□□□□ -1.28
SOX1O00570 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
SOX1O00570 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX1O00570 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX1O00570 OR1L1-202ENST00000373686 1083 ntBASIC7.03□□□□□ -1.28
SOX1O00570 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX1O00570 RNU6-1011P-201ENST00000384668 107 ntBASIC7.03□□□□□ -1.28
SOX1O00570 OR6C69P-201ENST00000394268 893 ntBASIC7.03□□□□□ -1.28
SOX1O00570 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 NRBF2P2-201ENST00000413087 861 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 RWDD4P2-201ENST00000426392 563 ntBASIC7.03□□□□□ -1.28
SOX1O00570 MTND3P21-201ENST00000433774 331 ntBASIC7.03□□□□□ -1.28
SOX1O00570 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 TCEA1P3-201ENST00000443005 880 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 MTCO2P25-201ENST00000447065 681 ntBASIC7.03□□□□□ -1.28
SOX1O00570 FAR2P1-206ENST00000449736 709 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.03□□□□□ -1.28
SOX1O00570 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.03□□□□□ -1.28
SOX1O00570 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 AC044913.1-201ENST00000557200 430 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 DPPA2P4-201ENST00000563717 878 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX1O00570 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 AC011374.2-201ENST00000607135 526 ntBASIC7.03□□□□□ -1.28
SOX1O00570 MIR7844-201ENST00000616161 122 ntBASIC7.03□□□□□ -1.28
SOX1O00570 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 LINC02495-203ENST00000636704 242 ntBASIC7.03□□□□□ -1.28
SOX1O00570 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX1O00570 AC087501.5-201ENST00000607496 2374 ntBASIC7.03□□□□□ -1.28
SOX1O00570 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 AC008555.1-201ENST00000561778 2757 ntBASIC7.03□□□□□ -1.28
SOX1O00570 AC087392.3-202ENST00000358446 1754 ntBASIC7.03□□□□□ -1.28
SOX1O00570 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
SOX1O00570 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX1O00570 AC131649.2-201ENST00000624925 4439 ntBASIC7.02□□□□□ -1.28
SOX1O00570 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
SOX1O00570 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
SOX1O00570 AC138393.1-206ENST00000540997 1886 ntBASIC7.02□□□□□ -1.28
SOX1O00570 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SOX1O00570 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms